Macadamia integrifolia (macadamia nut): 122071137
Help
Entry
122071137 CDS
T07436
Name
(RefSeq) WD repeat-containing protein ATCSA-1-like isoform X1
KO
K10570
DNA excision repair protein ERCC-8
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming03420
Nucleotide excision repair
ming04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122071137
09124 Replication and repair
03420 Nucleotide excision repair
122071137
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ming04121
]
122071137
03400 DNA repair and recombination proteins [BR:
ming03400
]
122071137
Ubiquitin system [BR:
ming04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
122071137
DNA repair and recombination proteins [BR:
ming03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
122071137
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
NBCH_WD40
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_SPT8
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_Nup120_160
WD40_RFWD3
Beta-prop_WDR75_1st
WD_LRWD1
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_VPS8
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
122071137
NCBI-ProteinID:
XP_042491364
LinkDB
All DBs
Position
Unknown
AA seq
458 aa
AA seq
DB search
MWKEVRDREAGKLRPYSFANRIRSNRVSSLQLSNHKEIISSHSGAINTLQLDLTEGRYLL
SGAADGSAAVYDVECATDYEGGHFIAKHKCIQFVDRQHEHGHQYSVSSAIWYPVDTGLFI
TGSFDKHINVWDTNNIQVVANFKMPGKVYRTAMSSIATSHMLIAAGTEDVQVRLCDISSG
AFTHTLSGHRDGVMTAEWSASSEWVLVTGGCDGAIRFWDIRRAGCFLVLDQTQTQLGRRP
PLNDQPSMKGSISKSSLPGQSSFTRNKTLHRKTANGALSKQLPALCKFPGQFKGSSRQRI
HPGMLSNHDRATAHYGAVTGLKVTEDGTYLLSAGSDSRLRLWDIESGRNTLVNYETTRLQ
TRKAIQLAVTQDSDTVFVPCMTSVKAFNVWSGQTSLTFRGHYEYVNCCSFNSQEQELYTG
GNDRQILVWSPQKLLISEADEANREEHMLTSDQDNWSD
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgtggaaggaggttcgagatagagaagcgggtaaactccgcccttattctttcgctaat
cgcattagatccaatcgtgtttcttctctgcaactttcaaatcacaaagagatcatctca
tctcactctggtgccattaatacccttcagcttgatttgacagagggaaggtatctgtta
tctggagcagctgatggatcagctgctgtttatgatgtagaatgtgcaactgattatgag
ggaggtcactttattgcaaagcacaagtgcatacagtttgttgacaggcaacatgagcat
ggccatcaatattctgtatcctcagccatttggtatcctgttgacacagggttattcatc
acaggttcatttgataagcatattaatgtctgggatacaaataatatacaggtggtagca
aattttaaaatgcctggaaaggtgtacaggacagctatgtcatcaatagctacttcccac
atgctgattgctgctgggactgaagatgttcaagttcgtttatgtgatatttcatcgggg
gcatttactcatacattatctggacaccgtgatggtgtaatgactgcagaatggtctgct
tctagtgagtgggttttggttactggtggttgtgatggggcaattcggttttgggacatc
aggcgtgcaggatgtttccttgtgttagatcagacccagactcaacttgggagacgccct
cccctcaatgaccaaccttccatgaaaggctcaatatcgaaatcctcactaccgggccaa
tcttcattcacaagaaacaagacattgcacaggaaaacagctaatggtgctctttcaaaa
cagttgccagccctttgcaagtttccaggtcaattcaagggttcgtcaaggcagagaata
catccagggatgctgtctaaccatgatcgtgcaactgctcactatggtgctgttactggg
ctcaaagtaactgaagatggaacgtacctgttgagtgcaggctctgattcaagattaaga
ctctgggatattgaatctggccgtaatactttggtgaattatgaaactacccgcctccaa
acccgcaaggcaatacaactagctgtaactcaggattcagacaccgtgtttgttccgtgc
atgacatctgtcaaagcattcaatgtatggtcgggtcagacttccctgacatttcgtggc
cactatgaatatgtgaactgttgctcgtttaattcacaagaacaggaattgtacacaggt
ggcaatgatagacaaattcttgtctggtcgccacagaagttgttaatttctgaagcggat
gaagcaaatagggaagagcatatgttgacatccgaccaggataactggagtgactga
DBGET
integrated database retrieval system
