Macadamia integrifolia (macadamia nut): 122071324
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Entry
122071324 CDS
T07436
Name
(RefSeq) serine/arginine-rich splicing factor SR45-like
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming03013
Nucleocytoplasmic transport
ming03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122071324
03015 mRNA surveillance pathway
122071324
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ming03019
]
122071324
Messenger RNA biogenesis [BR:
ming03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
122071324
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_occluded
RRM_3
Motif
Other DBs
NCBI-GeneID:
122071324
NCBI-ProteinID:
XP_042491593
LinkDB
All DBs
Position
2:14388403..14406910
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AA seq
403 aa
AA seq
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MAKPGRGRPSTPSGSDTGSSSPSRSTSGSDSRSRSRSRSLSRSFSSSSSPSRSVSSGSRS
PPPQRRSPAGAARRRPSPPAKRASPPPRKASPILQSVVLHIDKLTRNVNEGHLREIFSNF
GEVVNVELSMDRTVNLPRGYGYVEFKTRADAEKALLYMDGAQIDGNVVQARFTLPPRQKV
SSPPKAVPAAQKREAPQKDSVGADGEKSGQRQRESSPRRKPLSPPRRRSPLAHRRGESPR
RRLESPPRRRVESPVRRRGETPPRRRPASPARRRSPSPPLRRRRSPARASPRRIRGSPVR
KRSPLPVRRRTPPRRARSPPRRSPIRRRSRSPVRRPARSPSRSVSPRRGRAVAQRRGRSS
SYSGSPSPRKGGRRISRSRSPRRPGRGRSSSNSRSSSSLSPRP
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaccaggtcgtggtcggccgtccacgccttctggctcggacacgggttcgtct
tcaccatctcggtcgacttctggttcagattctcgttcccgctctcgttcgcggtcactt
tctcgctcattttcttcttcttcctctccgtctcggagtgttagttctggcagcagatcc
ccgccgccgcagaggagaagtcctgcaggtgcagccaggcggcgtccttctccacctgct
aaacgggcttcacctcccccaaggaaagcatctcccattcttcagtctgtggtcctgcac
attgacaagctaactaggaatgtgaacgaaggacatttaagagaaatattcagtaacttt
ggtgaagtagttaacgtggaactgagtatggatcgtacggttaatcttcctcgtggatat
ggctatgtggagttcaagacaagggctgatgcagaaaaagcgttactttacatggatggt
gcacaaattgatgggaatgttgttcaagcaagattcacattacctccacgccagaaagtg
tcatcacctccaaaagctgttcctgctgcccagaaaagagaagctccccaaaaggatagt
gttggtgctgatggtgaaaagagtgggcaacgccagagagaatcttcgccacgccgcaaa
cctctttcaccaccacgaaggagatcccctttagcacatcgaagaggtgaatcaccccga
aggcgtctcgaatcacctcctcgacggcgtgtagagtcccccgttcgtcgccggggtgaa
acacctcctagaaggaggccagcatctccagctagaagacgttctccatcacctcctcta
aggagacgcagatctcctgcacgagcttctccccgaagaatccgtggtagtccagtccgc
aaacgctcccctctccctgtgaggcggcgtactcctcctagacgagcacgaagtcctcct
cgaaggtcacccatacgtcggcgtagccgctctcctgttcgcaggcctgctcggtcacct
tcaagatcggtttctcctcgcaggggccgagcagtggctcaaagacgtggaaggtcttca
tcctattcgggatcaccgagtcctcgcaagggaggaaggagaatttcaagaagccgtagc
ccaagaaggcctggtcgaggaaggagcagtagcaatagccgcagcagtagttccctatct
cctaggccataa
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