Macadamia integrifolia (macadamia nut): 122071454
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Entry
122071454 CDS
T07436
Name
(RefSeq) BRCA1-associated RING domain protein 1-like
KO
K10683
BRCA1-associated RING domain protein 1
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
122071454
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ming03019
]
122071454
04121 Ubiquitin system [BR:
ming04121
]
122071454
03036 Chromosome and associated proteins [BR:
ming03036
]
122071454
03400 DNA repair and recombination proteins [BR:
ming03400
]
122071454
Messenger RNA biogenesis [BR:
ming03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
122071454
Ubiquitin system [BR:
ming04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
122071454
Chromosome and associated proteins [BR:
ming03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
122071454
DNA repair and recombination proteins [BR:
ming03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
122071454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
BRCT_2
zf-HC5HC2H
zf-C3HC4_2
zf-C3HC4_3
zf-HC5HC2H_2
zf-RING_6
zf-RING_UBOX
zf-RING_2
zf-RING_5
zf-C3HC4
zf-RING_10
zf-C3HC4_4
RTT107_BRCT_5
Prok-RING_4
PTCB-BRCT
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
122071454
NCBI-ProteinID:
XP_042491747
LinkDB
All DBs
Position
Unknown
AA seq
739 aa
AA seq
DB search
MADSVNSGRFLFLNPWLLHLQKMCLELKCPVCLNLLNRPLLMPCNHILCGSCIPRSTEFG
SECPICRLPFVHKDLRPAPHMENIVSIYRSMDEAFGANLLHWVPQSQIDLADVGRAFDQF
PATFTAVIDDRSRKEPINTMRMGIFGYPPSSTSSLHSNELVHAPLHQSGDKVEKSRRPDE
SYVPNNGGAVTKLGQTVGEQRRFHGEGSSTTSLQIQQPRDEQLGVSRAPEEDLNGFTQIS
HDSPPPFGDGKDSDDDSSARGNQHNVDKFLAKSTLNKEFVDGFVKEMGQGSLTQPGEDHG
RESKRMKLNYNPIDSDTDNGTHKSPFLDSENLMFQPKHKNGLSASAVQLSVGPDCSDSKS
TVICAFCQSSSLSKRTGPMIHYSNGKELVADEAAQPNIVHVHKKCIEWAPQVYFADDTVH
NLEKEISRGAKLKCSHCGLKGAALGCYADSCRKSFHVPCALQIEGCRWDTENFLVLCPTH
SSKKFPNEISKLGKRMRGFHASTNQINSSQSINTAGNPEGWVLCGSSLSVKEKNILAKFA
KMIGATVAKVWKPNVTHVIAATDEMGACSRTVKVLMAILHGRWVLKMDWIKACLEALQPL
PEEPYEVESDIHGCCNGPKKGRLRMMGKAPRLFTGLNFYFFGDFVPSYKECLEDLVLAAG
GTLLKTKGMLLPQDVKQATTSTFIVYNHDAPENCTLAEEYMECRFKEAEDFAAEFGYQVL
GHTWLLESIAACEIQSPIC
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atggcggattcggtgaacagtggtcgtttcctttttctcaatccatggttactccacttg
cagaaaatgtgtctagaactcaagtgtcccgtatgcttgaatttgctgaaccgaccatta
ttgatgccatgcaatcacatattatgcggttcttgcataccaagatcaacagagttcgga
tccgagtgtcccatctgcagattaccttttgttcacaaagatttaaggccggctcctcac
atggaaaatattgttagcatctatcgaagtatggatgaagcctttggagctaatctcttg
cattgggttcctcaaagtcaaattgatctggctgatgtgggaagggcattcgatcaattc
cctgctacgtttactgctgtaattgatgatagatcgaggaaggaacccattaacaccatg
cgaatgggaatctttggctacccaccctcatcaacatcatctttgcattctaatgaatta
gttcatgctcctctacatcaatctggagacaaagttgagaaatctagaagacctgatgaa
tcatatgtaccaaataatggtggtgcagtgacaaaattaggccaaacggtgggggaacag
aggaggtttcacggtgaaggaagttctactacttcattgcagattcaacagcctagagat
gagcaacttggtgtaagcagagctccggaagaggatttgaatgggttcacacaaatatcc
catgacagcccaccacctttcggcgatggaaaggattcagatgatgacagcagtgcccgt
ggtaaccagcataatgttgacaaattcttagctaaaagcacgttgaataaggaatttgtg
gatgggtttgtaaaagagatgggtcaaggatcattaactcaacctggagaggatcatggt
agggaatcaaagagaatgaagttgaactataatcctatagattctgatacagacaatggc
actcacaagtcaccatttttggattctgagaatttgatgttccaacccaaacacaaaaat
gggttatctgcttcggctgtgcaattatcagtcggtccagactgttcagattcaaagtca
actgtaatatgtgcattttgccagtcatctagtttgtcaaagcgtactgggccaatgata
cattattccaatggaaaggaattagtggcagatgaggcagctcaacccaatatcgtgcat
gtacacaagaaatgcattgaatgggcaccccaggtgtattttgctgatgatactgttcat
aatttggagaaagaaatttcaaggggtgcaaagctcaagtgcagccattgtgggctgaag
ggtgcagcccttggttgttatgcagattcctgccgaaagtcttttcatgttccctgtgca
ttacaaattgaaggttgtcggtgggatactgaaaattttctagttctttgtccgactcat
tcatcaaaaaaatttccaaatgagatctccaagcttgggaagaggatgagaggtttccat
gcttcaacaaatcaaataaattcaagtcaatccatcaacactgctggcaatcctgaagga
tgggttttatgtggatcttctctctctgttaaagagaagaatattttggccaagtttgca
aaaatgattggtgctactgttgcgaaggtttggaagccaaatgtcactcatgtcattgca
gccacagatgagatgggcgcctgcagcaggaccgtgaaagtccttatggctatcttgcat
ggaagatgggtcttgaaaatggactggataaaagcttgcttggaagctttgcagcctttg
cccgaagagccgtatgaagttgaaagtgacattcatggttgttgtaatggccccaaaaaa
ggcagacttaggatgatggggaaggcaccaaggctatttactggcctgaacttctacttc
tttggtgattttgtgccatcatacaaggaatgccttgaggacttagtgttggctgctggg
ggcaccctacttaagaccaagggcatgttactcccacaagatgttaagcaggcaactacc
tcaaccttcattgtttacaaccatgacgccccggaaaattgcacattggcagaggagtat
atggagtgtagattcaaagaagcagaagattttgctgctgaatttgggtatcaggtcctt
gggcatacatggcttttagaatcaatagcagcttgtgagattcagtctcctatttgctaa
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integrated database retrieval system
