Macadamia integrifolia (macadamia nut): 122071954
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Entry
122071954 CDS
T07436
Name
(RefSeq) replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming03030
DNA replication
ming03410
Base excision repair
ming03420
Nucleotide excision repair
ming03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
122071954
03410 Base excision repair
122071954
03420 Nucleotide excision repair
122071954
03430 Mismatch repair
122071954
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ming03032
]
122071954
03036 Chromosome and associated proteins [BR:
ming03036
]
122071954
03400 DNA repair and recombination proteins [BR:
ming03400
]
122071954
DNA replication proteins [BR:
ming03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
122071954
DNA Replication Termination Factors
ELG1-RFC complex
122071954
Chromosome and associated proteins [BR:
ming03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
122071954
DNA repair and recombination proteins [BR:
ming03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
122071954
Check point factors
HRAD17(Rad24)-RFC complex
122071954
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_22
AAA_16
AAA_assoc_2
AAA_11
DNAX_ATPase_lid
AAA_14
AAA_5
DUF815
AAA_30
RuvB_N
AAA_24
AAA_7
ATPase_2
bpMoxR
AAA_3
ResIII
AAA_19
nSTAND3
AAA_2
TniB
TIP49
AAA_28
AAA_25
Mg_chelatase
Guanylin
Motif
Other DBs
NCBI-GeneID:
122071954
NCBI-ProteinID:
XP_042492383
LinkDB
All DBs
Position
2:17616193..17630827
Genome browser
AA seq
357 aa
AA seq
DB search
MAETISPMEIDDADRSPKPNKGKNVVIVSSDGKATPWVEKYRPQSLADVAAHRDIVDTID
RLTNENRLPHLLLYGPPGTGKTSTILAVARKLYGAQFHNMILELNASDDRGIDVVRQQIQ
DFASTQSFSFGGKSSVKLVLLDEADAMTKDAQFALRRVIEKYTRNTRFSLICNHVNKIIP
ALQSRCTRFRFAPLDASHVRERLKHVIESEGLDVAESGLAALVRLSNGDMRKALNILQST
HMASPHITEEAVYLCTGNPMPKDIEQICYWLLNESFTTSFNRISEIKTRKGLALVDIVRE
VTMFIFRIKMPSDVRVHLINDLADIEYRLSFGCNDKLQLGSLIASFTRARSSMVAAA
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggcggagacgatatcgcccatggaaatcgacgatgccgatcggtcaccgaagcccaac
aagggcaagaacgtggtcatcgtctcatcggacggcaaagccacgccgtgggtcgagaag
taccgccctcaatccttagcagacgttgccgctcaccgagacatcgtggacacgatcgat
aggcttacgaacgagaacagattgccgcatctcctcctttacggtcctcctggaaccggc
aagacgtcgacgattcttgccgttgctcggaagctctatggagcccagttccacaatatg
atcttagagctgaatgcgtccgatgacaggggtatcgacgtcgtgcgacagcagattcaa
gactttgccagtacccagagcttctcctttggtggaaagtcatctgtgaagttggttcta
ctggatgaggcagatgccatgacaaaggatgcacaatttgccttgcgtagagtgatagag
aaatacacaaggaacactagattttcccttatctgtaatcatgtcaacaaaattattcca
gcattacaatccaggtgcacccgatttcgatttgctcctcttgatgcttcgcatgtcagg
gaacgtcttaaacatgtgatagagtctgaagggcttgatgtagctgagagtggcttagct
gcccttgtacggttgagcaatggtgacatgagaaaagcgttgaacattttgcagtcaacc
catatggcttctccgcatataacggaagaagcagtttacctgtgcactggaaatccgatg
ccgaaagacattgagcagatatgctactggcttctaaacgaatcatttacaaccagtttt
aatcggatatccgaaatcaagacgagaaaagggttggccttggttgacattgtgagagag
gtcactatgttcattttcaggatcaaaatgccatcagatgtccgagtccatttgataaat
gatttggctgatattgagtacaggttgagttttggttgcaatgacaagttgcagcttgga
tcacttatcgcttcttttacacgcgctcgatcttctatggttgctgcagcatag
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integrated database retrieval system
