Macadamia integrifolia (macadamia nut): 122072233
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Entry
122072233 CDS
T07436
Name
(RefSeq) small RNA degrading nuclease 5-like
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
122072233
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ming03009
]
122072233
Ribosome biogenesis [BR:
ming03009
]
Eukaryotic type
Pre-60S particles
RNases
122072233
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-GeneID:
122072233
NCBI-ProteinID:
XP_042492746
LinkDB
All DBs
Position
2:15481725..15498783
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AA seq
598 aa
AA seq
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MLCPQAPLLTVTSFTPCTSSVVLSFNLKDRGFLSGPRPKMASACLKSQEQTNNDEKDTRK
SNGTTTYFDVYGPQGKADVVFKTPTTDSLLNLHDIQELVTWVLSEGFMPSWVFIKNKPLI
PKVVLLYVPGLDAEFYMSQSSLLCGLKEIFGNPRAVLALSCVSDGMRTIDALLTCKLKRK
REEMSSVSKCPEQVSKEHMKELPFPVSYYTLTAKELEDNGYCLTQPDFISTLPSPSESPP
YEMLALDCEMCVTINGFELTRVTLVDVEGQVVLDKLVKPSNAILDYNTRYSGITCEMLSG
VATTLTDIQEEFLKFVYKETILIGHSLENDLLALKISHGLVIDTAILYKNPRGVRYKTAL
RVLARRFLSREIQASENGHDSIEDARATMEVALLKIRHGPEFGSPPSFMRKKLVTILSES
GKTCSFIDDVSLVKRYAAGSCHAFPVSSDDEALSRARKEVKNDNVHFVWTQFSELNSYFQ
RQAKDVEKLNGKIAEMISLLTCRKTSTRRKGIKHTVTPELEDILTRMDARIRSLYAMLPR
NAMLIVCTGHGDTAIVQRLRRMITEQEETPICRDKLVRVLEELQAQAELALCFVGVKH
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgccctcaagcccctctccttactgttacctcgttcaccccttgcacaagctcc
gttgttctatccttcaatttgaaagaccgggggtttctctcgggtccaagaccgaagatg
gcttctgcgtgcctcaagagccaagagcagacaaacaacgatgaaaaagataccagaaag
agcaatggcaccacaacttacttcgacgtctacggacctcaagggaaggcagatgttgtt
tttaaaactcctacaactgactcattattgaatctgcatgacattcaggaacttgttacc
tgggtgcttagtgaaggatttatgccatcttgggtctttatcaaaaacaagcctctgatt
ccgaaagtggtcctgctttatgtaccaggccttgatgctgaattttacatgtcccagtcc
agcctactttgtggccttaaagagatttttggcaatccaagggcagttttagctcttagc
tgtgtatcagatggaatgcggacaatagatgcacttctaacttgcaaactgaaaagaaag
agggaggagatgagttcagtttccaagtgtcctgaacaagtaagcaaagaacatatgaag
gagttaccttttccggtttcttattacacacttacagcaaaagagctagaagataatggg
tactgtctaacccagccagattttatctccactcttccttctccttcagaatccccccct
tatgaaatgctggcacttgactgtgagatgtgtgtcacaatcaatgggtttgaactcaca
agggtaacgctagttgatgttgaaggacaggtagtgttagacaaattggttaaaccttct
aatgctattcttgactacaatactaggtatagtggaatcacatgtgagatgctgagtggg
gtggctacaactcttacagatattcaggaagagtttctaaagtttgtttacaaggagacc
atcctaattgggcactctttggagaatgacctactagccttaaagatctcccatggtttg
gtgattgatactgcaatattgtataaaaaccctcgtggtgtacgctacaagactgcttta
agagtgcttgcccggagatttctttctagagagatacaagcatcagaaaatggacatgat
agtattgaagatgcaagagccacaatggaagtagcactgttgaagattagacacggacct
gaatttggttcaccaccatcattcatgcggaagaaactggttactattttgagtgagagt
ggcaagacctgctcttttattgatgatgtttccttggtgaagcggtatgctgctggatca
tgccatgcatttcctgtatcttcagatgatgaagccctttcgagggccagaaaggaggtg
aagaatgataatgtacactttgtctggacccaattctcggagttgaattcctatttccag
agacaggcaaaggatgtggagaagttgaatgggaaaattgcagagatgatatcattgctt
acatgtcgtaagacatctacaagaaggaaaggcatcaaacacactgtgacccctgaattg
gaggacatattaactcgtatggatgctcgaatacgaagcctctatgccatgttaccaaga
aatgctatgcttattgtttgcactggtcacggagacacagcaattgtccaaagattaagg
agaatgattacagagcaggaagagaccccaatttgccgcgataaacttgtgagggtattg
gaagagcttcaggcgcaagcagaactggctctatgttttgttggtgtgaagcattga
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