KEGG   Macadamia integrifolia (macadamia nut): 122072870
Entry
122072870         CDS       T07436                                 
Name
(RefSeq) DNA repair protein RAD5B
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
ming  Macadamia integrifolia (macadamia nut)
Brite
KEGG Orthology (KO) [BR:ming00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ming03400]
    122072870
DNA repair and recombination proteins [BR:ming03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    122072870
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C zf-C3HC4_3 zf-C3HC4 UBA_RAD5A HIRAN DEAD zf-RING_2 zf-C3HC4_2 zf-RING_5 Prok-RING_4 ResIII RING_XB3-XBAT31 zf-RING_UBOX zf-C3HC4_4 Baculo_IE-1 zf-RING_4 ERCC3_RAD25_C KinB_sensor
Other DBs
NCBI-GeneID: 122072870
NCBI-ProteinID: XP_042493226
LinkDB
Position
3:25840435..25846846
AA seq 1089 aa
MATIILDDEQKVKMIRTVLGAEVPESEILQAFLVCGNRPDAVISHMLDTPGFPNPPVDVK
RTSTGARISTQIKEKMPADSAGADPIKVLDPKAEVKMEELAMGFEKNPDNELETKIRVKE
EPLDVGCASSSDPLDAQHVKGHKSVFEKNLAKLLERKSRVKEEDLDKGCEKNPINLESKR
QTANTRLPWVPSRVKQESPISSPDVEDGEFPEEADWFLVGMTSVTGFSTCKRKRLEFNEI
VHFALPKRFSDIVRFSTKRSGEIGRMAMDWAKCIVPLVSSTKVKLCGRFVGTPSVLRLMQ
EIPLYLSFYVHHSILGQGDPSSWNIIEPSMSYSTSGPLLNLFQLLNIKPFQQAEFTPEEL
DSRKRKLNLKGDSDLFSSTKRRKGSQQVSEPNNDEQAISESALNKLVGTADVYNLQEMEP
PITLNCNLKPYQRQALHWMSELEKGLDVEEAAKTLHPCWSAYRVSDRRAPSIYVNIFSGE
ATAQFPRATQMARGGILADAMGLGKTVMTIALILAMRGKGIPVDQKPTTHRADDTENKMK
VSQKKAKTIVKGGTLIVCPMALLSQWKDELEAHSKPGCISVVVHYGGDKSINPKVFSEPD
VVLTTYGVLSSAYKQGPELSILHRVEWFRVVLDEAHTIKSSKTLVAQAAFALSSHCRWCL
TGTPLQNRLEDLYSLLCFLHVEPWCNWAWWNKFIQRPYENGEERGLRLIKAILRPLMLRR
TKESKDKYGRPILVLPPVEIKTVVCVQSQVERDFYDALFKRSKVQFDKLVAQGKALHNYA
NILELLLRLRQCCNHPFLVMSRCDTKSERYAELDKLARRFLEGNSNRSNRNQIVPTRAYV
EEVVEDIRQGKNTECPICLEFPDDHVLTPCAHGMCRECLLKSWPAQEGGVCPICRTSLKK
SELITCPLDNQFWIDIENWKESCKVLKLLDCLELASSTGEKSIIFSQWTSFFDLIQTPLE
NKGIKFLRFDGKVDQKQRGRVLKEFSENNEKKVLLMSLKAGGVGLNLTAASHVFIMDPWW
NPASEEQAIMRIHRIGQKQRVCVKRFIVKETVEERMQEVQARKQRMIAGALTDEEERSTR
LEDLKMLFR
NT seq 3270 nt   +upstreamnt  +downstreamnt
atggcgacaattatactcgacgatgaacagaaagtcaagatgatccggacggttctggga
gccgaagtgccagaatcagagatcctccaagcatttttagtctgtggaaacagaccagat
gcagttataagtcacatgctcgatactcctgggtttccaaatccgccggtggatgtgaag
cggacgagtacgggagcccggatctctacccagataaaggaaaagatgccagcagattct
gccggagctgatcccattaaagtgttggacccaaaggctgaagtgaagatggaagagctt
gcaatgggtttcgagaagaaccctgacaacgagttggagacgaagatcagagtaaaggag
gaaccactcgatgtgggttgtgcaagttccagcgatccactcgatgctcaacatgttaaa
gggcataagtcagtttttgagaagaacttagcaaagttgttggagaggaagagtagagta
aaggaggaagatctcgataaaggttgtgagaagaaccctataaatttagaaagtaaacga
caaacggctaacactcgtcttccatgggttccttctcgtgtcaagcaagaaagccccatt
tcgagtccagatgtagaggatggcgagttcccagaagaagcagactggtttctggtgggg
atgacttctgtcacggggttttctacgtgcaaaaggaagagattggagttcaatgagatc
gttcattttgctctccctaagagattttcagacattgttcgcttctcaaccaaacgatca
ggggagattgggaggatggcgatggattgggcaaaatgcatcgtcccccttgttagttct
accaaggtgaagttatgtggtcgtttcgtgggcacaccttctgtccttaggctgatgcaa
gaaatcccattatacttgagtttttatgtgcatcattcaattttgggccagggggatccg
tcttcatggaatattatagaaccatctatgtcatactcaacttctgggcctctcctaaat
ttgttccagctgttgaatatcaaaccatttcagcaggcagaattcacaccagaggagctt
gatagtcgaaaacgcaagttaaatctgaaaggggattcggatctcttttcgagcaccaaa
agaagaaagggcagtcaacaggttagcgaaccaaacaatgatgaacaagctatctcagag
tcagcattgaacaagcttgttggtacagcagatgtatacaacttgcaggagatggaaccc
ccgatcacactaaattgtaatttaaagccataccagagacaagctctccactggatgtca
gaattggagaagggcttagacgtcgaggaggcagcaaaaacactacatccatgctggtca
gcttatcgtgtctctgacaggagagctccttcaatttatgtgaacatcttctcaggggaa
gcaactgctcaattccctagggcaactcagatggctagaggaggaattttagcagatgct
atggggcttgggaagactgtgatgacaattgctcttatacttgcaatgcgaggcaagggt
atccccgttgatcaaaagcccaccacacatcgtgcagatgatactgagaataaaatgaag
gtctctcaaaagaaggccaaaacaatagtaaaagggggcactcttattgtctgccctatg
gcattgttaagccagtggaaggatgagcttgaagcccattcgaagccaggctgtatttca
gttgttgtccactatggtggtgataagagcatcaaccccaaagtgttttcagaacctgat
gtggtcttgacaacgtacggagtcttaagttccgcttacaaacaaggtccggaattaagc
attctccaccgagtagagtggttcagggtggtgcttgatgaagcacacacaattaaatcc
tcaaagacccttgttgctcaggcagcctttgcattatcctcacattgcaggtggtgtctg
acaggaactcctctccagaaccgtttggaagacctctacagccttttgtgctttttgcac
gttgagccatggtgcaactgggcctggtggaataaattcattcaaaggccttatgaaaat
ggcgaagaaagaggcttgagattgattaaggctatccttaggccactgatgctaaggaga
accaaggaatcaaaagacaaatacgggaggcccatactggttctcccacctgttgagatc
aaaaccgttgtgtgtgtacaatctcaagttgaacgggatttctatgatgccctctttaag
agatcaaaggtccagtttgacaagttagtggcacaaggcaaggcgctccacaattatgca
aatattcttgagcttctactccgattgaggcagtgctgcaaccacccatttcttgtcatg
agccgatgtgataccaaaagcgagcggtatgcagagttggacaagcttgcaaggcggttc
cttgaaggcaactctaatcgatccaaccggaatcagatagtcccaactcgagcttatgtt
gaagaggttgtggaggatatccgtcagggcaaaaacaccgagtgcccaatctgcctagag
tttccagatgatcatgtactcactccatgtgcacacgggatgtgtagggagtgtctgctc
aagagctggccagcccaagaaggaggtgtctgcccaatttgtaggacgtcgttgaagaag
agtgaactcataacatgcccattagacaaccagttctggattgatattgagaactggaag
gaatcatgcaaggttttgaagctccttgattgcctggagcttgcatctagtactggtgaa
aagagcattatctttagtcaatggacttctttttttgatctgatacagacccctctggag
aacaaaggaattaagttcttaaggtttgatggaaaagtggatcaaaagcaaagagggagg
gttttgaaggagtttagtgagaacaatgagaaaaaggtgttgttgatgtcattgaaagct
gggggtgttggtttaaatttgactgcagcatctcatgttttcataatggatccatggtgg
aatcctgcatcagaggaacaagccataatgcgaatccatcggattggccagaaacaaagg
gtttgtgtgaaaagattcattgttaaggaaacagtggaggagaggatgcaagaggtccaa
gcaaggaagcaaaggatgatagcaggagccctcactgatgaggaagagagatctactagg
ctggaggatctcaaaatgctttttagatag

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