Macadamia integrifolia (macadamia nut): 122072959
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Entry
122072959 CDS
T07436
Name
(RefSeq) protein RDM16-like isoform X1
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122072959
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ming03041
]
122072959
Spliceosome [BR:
ming03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
122072959
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
Motif
Other DBs
NCBI-GeneID:
122072959
NCBI-ProteinID:
XP_042493335
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Position
3:complement(2431567..2434443)
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AA seq
653 aa
AA seq
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MASKVVPETSAPNQSPSIKVSSISTTNENKGVSITRSHEVPGKFSTDGTTSAAGKSGSLS
LDALAKAKKALQMQKELSEKLKKIPLLNKGASSDGSQQFGSTDKEVPKSQLSSTARQQGS
IPPTTAAVASVSQEKLSITTVPTAATASVKPPTTGVTALPGLTTVPNYEAVKRAQELAAK
MGFHQDPEFAPLINMFPGNTTTDVAVQQKPSKAPVLRLDALGREIDEHGNVINMPNLTNL
STLKVNINKQKKEAFQILKPELDVDPELNPHFDPGMGINKTKLLRPKRMAFQFVEEGKWS
KQAEIIRFKSQFGEAQAKELKTKQAQLAKAKAEPDINPNLIEVSERVVHKEKQKDPIPET
EWWDIPLLLSGTYGDLNEGNITGDKLKMDKITIYVEHPLPIEPPAEPAPPPPQPLKLTKK
EQKKLRTQRRLAKEKDRQEMIRQGLLEPPKPKVKMSNLMKVLGSEATQDPTRLEMEIRSA
AAEREQAHVDRNIARKLTPAERREKKERKLFEDPNTVETLVSVYRINDLSHPQTRFKVDV
NAQENRLTGCAVISDGISVVAVEGGSKPIKRYGKLMLQRINWAASVGNEEDGEDENKEKP
VNKCDLVWQGSVAKPSFNRFLVHQCRTEAAARKVFSDAGVGHYWDLALNYTDD
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaaaggtagtgcctgagacttctgcacccaatcaatctccttctatcaaggta
tcttcaatttccaccaccaatgaaaataagggagttagtattaccagatctcatgaggtt
cctggaaaattcagtacagatgggacaacttcagctgctggcaagagtggaagtctgtct
cttgatgctttagcgaaagctaagaaagctttgcagatgcaaaaggaattgtcagaaaag
ctgaaaaagattccattgttgaataaaggagctagctccgatggtagccaacagtttgga
tcaacagacaaggaggtacctaaatctcagctatcaagcacagcaaggcagcaaggttct
atcccacccactactgcagcagtggcttccgtttcgcaggaaaaattaagcataacaact
gtgcctactgcagctacagcttctgtgaagccccccaccactggcgtgactgctcttcct
gggcttacgaccgtacctaactatgaagctgtaaaacgagcacaagaacttgctgcaaag
atgggatttcaccaggacccagaatttgctcctctcataaacatgtttccagggaacact
acaacagatgttgctgtccagcagaagccatccaaagcccctgttctccgtctggatgca
cttggtagggaaatagatgagcatggaaatgtaatcaatatgcctaatctaacaaatctc
agcacattaaaggtcaacatcaacaaacagaaaaaggaagctttccagattcttaaacct
gagctggatgttgatccagaattgaatcctcatttcgaccctggaatgggcatcaataaa
acgaagctgttgagacccaagaggatggcatttcagtttgtagaggaaggaaaatggtcg
aagcaggcagaaataattagattcaagagtcaatttggagaagcacaagctaaagagttg
aagacaaagcaagcacagctggcaaaggcaaaggcagagcctgatatcaatccgaatttg
atagaggtgtcagagagagttgtccacaaggaaaaacagaaggacccaatcccagaaact
gagtggtgggatataccacttttgctttctggaacctatggcgatttaaatgaaggtaac
atcactggagataaacttaaaatggataagattacaatttatgtcgaacatcctcttcct
attgagccccctgcagaacctgctccgccacctccacagcctctgaaacttaccaagaag
gaacagaagaaattgcgcacacagcggcgcttagcaaaggaaaaagataggcaggaaatg
ataaggcaaggtctgttagaacccccaaagcccaaggtgaagatgagcaatctcatgaaa
gttcttggttcagaagcaacacaagatcccaccaggcttgaaatggaaatacggagtgca
gctgctgagcgtgaacaagcccatgttgacagaaacattgcacggaagctcacaccagca
gagcgccgtgagaagaaagaaaggaagctctttgaggatccaaatacagtggagaccctt
gtgtcggtgtatcggatcaatgacctttcacatccacagacccgctttaaggttgatgtc
aatgcccaggagaatcgcttgacgggctgtgctgtcatttcagatggtattagtgtggtg
gccgttgaaggtggtagtaagcccatcaagaggtatgggaagttgatgctccagcggatc
aattgggctgcctcagtggggaatgaagaagacggtgaagatgaaaacaaggagaaacca
gttaacaagtgtgatttagtgtggcagggaagtgttgctaagccaagcttcaacaggttt
cttgttcatcagtgtaggaccgaagctgccgcaaggaaagtgttctctgatgctggggtt
ggtcactattgggatctggcccttaactatacggatgattaa
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