Macadamia integrifolia (macadamia nut): 122073307
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Entry
122073307 CDS
T07436
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming03013
Nucleocytoplasmic transport
ming03015
mRNA surveillance pathway
ming03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122073307
09122 Translation
03013 Nucleocytoplasmic transport
122073307
03015 mRNA surveillance pathway
122073307
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ming03019
]
122073307
03041 Spliceosome [BR:
ming03041
]
122073307
Messenger RNA biogenesis [BR:
ming03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
122073307
Spliceosome [BR:
ming03041
]
Complex C
Other components
EJC/TREX
122073307
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_ACIN1
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
122073307
NCBI-ProteinID:
XP_042493804
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Position
3:complement(28369170..28382797)
Genome browser
AA seq
685 aa
AA seq
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MSSQYPVLDNRPIDQWKVAELKEELKSRKLTTKGLKDDLIKRLYEAIRIEREAAAAEEEV
FNGIDCDTKEVKSEEAEPKLIDTEIIKDTEDDSEIETQAAEDTKDGSEIKIQASEDTKEG
NEIKTQAADADESVVDIDNSSPEIGQGKVQAEESTGNTDPVAVVDEPVVDAVSVVTTITV
SHTVVTQLASSKQELQNNETMTENEDQKPLQGDAVLNASDPYNQVSEVSPVLGFQVKCES
ISTDSVSIIEKNELKDNLNADNFHLDLEVKPEMVQPSSSDVPPNDGNVHPLDDQEPCENQ
GSVEDIDDTNNPNLDISKKNDSADVGSSEKLNLDRSSGDDSMEEDVMESKQIDSIHNSDE
VRDKNELTEVRVVKEESPVDAMGGGFSSEKKEVPDDNKTRHAVPAEKRKLEDQEAVGNNE
PPKRQRRWNSEKIEVPQPQASIFTPATPKDASHSTFPKRNFARSDSNISEESPKERVVPP
SPKPPTTSLRIDRFLRPFTLKAVQELLAKTGNLSSFWMDHIKTHCYVTYSSVEEAIETRN
ALYNLQWPPNGGRLLVAEFVDPQEVKMRAEAPPRPQAPPVSTSPKTQAAPSNFQTQSTVR
QHGLRQQLPPPPPLPPPPPPPPISDQPIARERLPLPPPPPLKKPEPPIVTLDDLFRKTKA
IPRIYYLPLSDAEVAAKLAAREKKA
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtcagtatcctgttcttgacaaccgacccattgatcagtggaaagttgcagag
ttaaaggaagaacttaagagcaggaagcttacaacaaagggtttgaaggatgacttgata
aaaaggttgtatgaagcaattcgcatcgagagagaagctgctgctgctgaggaagaagtt
tttaacggtattgattgtgataccaaagaggttaagagtgaagaggcagagccaaagctg
attgacactgaaatcatcaaagataccgaggatgatagtgaaattgaaactcaagctgca
gaagataccaaggacggcagtgaaattaaaatccaagcttcagaagatacgaaggagggg
aatgagattaaaacccaagcagcagatgctgatgagtctgttgtcgatatcgacaatagt
tcacctgagataggtcaagggaaagtacaagctgaggagtcaactggtaatacagatccc
gttgctgttgttgatgaaccagtagttgatgctgtgtctgtggtaaccactatcacagtc
agtcacaccgtggtaactcagttagcatcaagcaagcaggagttgcagaacaatgaaacc
atgacagagaatgaggatcaaaagcctctccagggagatgctgtgctcaacgcttccgat
ccgtacaatcaggtatctgaggtcagccctgttttagggttccaagtaaagtgtgagtct
atttctactgattctgtgtcaattattgaaaagaatgaactaaaggataatttgaatgct
gataatttccatttagacctagaagttaagccggaaatggtgcaaccatcatccagtgat
gttcctcctaatgatggcaatgtacatccactggatgatcaagagccttgtgagaaccag
ggctctgttgaagatattgatgacaccaacaaccctaatctggacattagcaagaaaaat
gatagtgctgatgtggggtcctcagaaaaattaaatttagaccgaagctccggtgatgat
tcaatggaggaggatgtaatggagagtaagcagattgattctattcataattctgatgaa
gtgagagataagaatgagctaactgaagtgcgtgttgtaaaagaggaaagtcctgttgac
gctatggggggtggcttctcttctgagaagaaggaagttcctgatgataataagactcgt
catgctgttcctgctgagaaaagaaaacttgaagatcaagaagcagttgggaacaatgaa
cctccaaaaagacagcgtcgatggaattctgaaaaaattgaagttccccaaccgcaagcc
tctattttcacacctgcaacacctaaagatgcttctcactctaccttcccgaaacgaaac
tttgctaggtccgactcaaacataagcgaagaatcacctaaggaacgtgttgttccacct
tcaccaaaacctccaactacatcccttagaatcgatcgttttctccgtccatttactctc
aaagcagtgcaagagcttctagccaaaactggaaatttgtcgagtttctggatggatcac
atcaagacacactgctatgttacgtattcatcggtagaagaagccattgagactcgaaat
gcgctgtacaatctacagtggccaccaaatggaggacgtctcctggtggccgagtttgtt
gatccccaggaagtgaaaatgcgggctgaagctcccccccgccctcaagcaccacctgta
agcacgagtccaaaaacacaagcagccccttcaaacttccagacccagtcaactgttcgt
caacatgggctgcggcagcagcttccacccccacctccactcccaccaccaccaccaccc
ccaccaatttctgaccaacccatagcaagggaaaggctgccacttcctcccccaccaccc
ttgaagaagccagaaccaccaattgttacccttgatgatctgttcaggaagactaaagct
atccctcggatatattacttgcctttgtctgatgcggaggtcgcggcaaaactagcagca
cgagagaaaaaggcttga
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