Macadamia integrifolia (macadamia nut): 122073635
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Entry
122073635 CDS
T07436
Name
(RefSeq) vacuolar protein sorting-associated protein 35B-like
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122073635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ming04131
]
122073635
Membrane trafficking [BR:
ming04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
122073635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Urb2
Motif
Other DBs
NCBI-GeneID:
122073635
NCBI-ProteinID:
XP_042494180
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All DBs
Position
3:12725062..12759578
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AA seq
790 aa
AA seq
DB search
MIADGVEDEEKWLAEGIAGLQHNAFYMHRALDSNNLRDALKYSAQMLSELRTSRLSPHKY
YELYMRAFDELRKLEMFFREETKRGCSVIDLYELVQHAGNILPRLYLLCTVGSVYIKSKE
APAKDVLKDLVEMCRGVQHPVRGLFLRSYLSQVSRDKLPDIGSEYEGDADTVMDAVEFVL
QNFTEMNKLWVRMQQQGPVREKEKREKERNELRDLVGKNLHVLSQIEGVDLDMYKDTVLP
RVLEQVVNCKDELAQYYLMDCIIQVFPDEYHLQTLETLLGACPQLQATVDIKTVLSRLMD
RLSNYAASSAEVLPEFLQVEAFAKLSNAIGKVIEAQVDMPVVGAITLYVSLLTFTLRVHP
DRLDYVDQVLGACVKKLSGRPRLEDSRATKQVVALLSAPLEKYNDIVTALMLSNYPRVMD
HLDNATNKVMAVVIIQSIMKNNSCILTADKVEALFELIKGLIKDLDGSPIEELDEEDFKE
EQNSVARLIHMLYNDDPEEMFKIICTVRKHILTGGPKRLSFTVPPLIFSALKLVRRLQGQ
EGEVAGEDEAATPKKIFQILHQIIEALSYVPASELALRLYLQCAEAANDCDLEPIAYEFL
TQAFILYEEEVADSKAQVTAIHLIIGTLQRMNIFGVENRDTLTHKATGYSAKLLKKPDQC
RAVYACSHLFWVDEQDGIKDGERVLLCLKRALRIANAAQQMANVTRGSSGPVTLFVEILN
KYLYFFEKGNPQITSAAVQGLVELITTEMQSDATTPDPSAEVFFASTLRYIQFQKQKGGL
MGEKYEPIKV
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgatcgctgacggagtggaagacgaagagaaatggctggcggaagggattgctggcctt
caacacaacgccttctacatgcatcgagctctggattcgaacaatctcagagacgctctc
aagtattctgctcagatgctctccgagcttcgcacttcccggctttcccctcacaaatac
tatgagctttacatgcgggcgttcgatgagttgaggaaattggagatgttcttcagggag
gagaccaagcgaggttgctctgtgatcgacctctacgagcttgtacagcatgctggaaac
atacttcctagattgtatctcttgtgcacggtgggatctgtatacatcaaatcgaaggag
gctcctgctaaggatgttcttaaagaccttgtggaaatgtgtcgtggagttcaacatcct
gtacgtggtctctttctcaggagttacctttctcaagtcagtagggataagttgcccgat
attgggtctgagtatgagggtgatgctgacacagtcatggatgctgtcgagtttgtactt
caaaacttcacagagatgaataagctttgggtccgaatgcagcaacagggacccgtccgg
gaaaaagagaagcgggaaaaagaaaggaacgagcttcgtgatcttgttggcaaaaatctg
catgtcctcagtcagatagagggtgttgaccttgatatgtacaaagatactgtgcttccg
agagttttggaacaggttgttaattgcaaggatgagcttgctcaatattacttgatggat
tgcataatccaagtctttccagatgaatatcatttgcagactcttgagacattgttgggt
gcttgcccccagcttcaggcgactgttgatatcaagacagtgttatcacgacttatggat
agactgtcaaactatgctgcttcaagtgcagaagtattacctgaattcttgcaggtagag
gcttttgcgaaattgagcaatgccattgggaaggtgatagaagcacaggttgatatgcct
gttgttggagctataactttgtacgtgtctcttctgacatttactcttcgtgtccatcct
gatcggcttgattatgtagatcaagtgctgggagcatgcgttaagaaactttctggaaga
ccaagacttgaagacagcagagctacaaagcaagttgttgcacttctgagtgctcctttg
gagaaatacaatgatattgttactgctctgatgctttcaaactatcctcgagtgatggat
caccttgataatgctacaaataaagtcatggcagtggttattattcaaagcattatgaaa
aataacagttgtattttgactgcggataaggttgaagcattgtttgaactaataaagggt
cttataaaggatttggatgggtctcctatcgaagagcttgacgaagaggatttcaaggag
gagcaaaattctgttgctcgtctcattcacatgctctataatgatgatccagaggagatg
tttaagattatatgtactgtgaggaagcatattcttactggaggaccaaaacgactttct
tttactgttcctcctctaattttttctgcccttaagttggtcaggcgattgcaaggtcag
gagggggaagtggctggagaagacgaggctgcgactcctaagaaaatttttcagattttg
catcagattattgaggctctgtcatatgttccggcatctgaacttgctctcagattgtac
ttgcagtgtgctgaggctgccaatgactgtgatcttgaacccattgcatatgagttttta
acccaagcatttatcttgtatgaggaagaagttgcggattcaaaagcacaggtaactgca
atacacctaataatagggactcttcaaaggatgaacatatttggtgttgagaacagagat
actctaacacacaaggccacagggtattcggcaaaacttctaaagaaacctgatcagtgc
agagcagtttatgcatgttcacatctcttctgggttgatgaacaggatggtatcaaggat
ggagaaagggtcctgctttgcctaaagcgtgccttaaggattgcaaatgctgctcaacag
atggccaatgtgacaaggggtagcagtggaccagtcacactctttgttgaaatactaaac
aagtatctttacttctttgagaaggggaaccctcagatcactagtgcagcagttcagggc
ttggttgaactaatcacaacagagatgcaaagtgatgcgacgacaccagatccatctgca
gaagtattttttgccagtacattgcgctacattcagtttcagaaacagaaaggtggtttg
atgggtgaaaaatatgagcccatcaaagtctga
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