Macadamia integrifolia (macadamia nut): 122073858
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Entry
122073858 CDS
T07436
Name
(RefSeq) WD-40 repeat-containing protein MSI2-like isoform X1
KO
K10752
histone-binding protein RBBP4
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming03082
ATP-dependent chromatin remodeling
ming03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122073858
03083 Polycomb repressive complex
122073858
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ming03036
]
122073858
Chromosome and associated proteins [BR:
ming03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
122073858
Histone modification proteins
HAT complexes
HATB complex
122073858
HDAC complexes
Sin3A-HDAC complex
122073858
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
122073858
PRC2.2
122073858
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
122073858
Heterochromatin formation proteins
Other heterochromatin formation proteins
122073858
Chromatin remodeling factors
NuRD complex
122073858
NuRF complex
122073858
NuRF complex (fruit fly)
122073858
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WDR55
WD_LRWD1
EIF3I
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_NUP159_NUP214
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_RIG_1st
eIF2A
MIOS_WD40
Beta-prop_IFT140_1st
RMC1_N
Motif
Other DBs
NCBI-GeneID:
122073858
NCBI-ProteinID:
XP_042494460
LinkDB
All DBs
Position
3:12618367..12624473
Genome browser
AA seq
415 aa
AA seq
DB search
MGEEQVAEEFSVWKKNTPFLYDLVISHAFEWPSLTIQWLPTPSPAQTTSTSNNTTSSFAA
QRLILGTHTSDNAPNFLMIADVHLPLSPTATTINSQHNSIVEPSPSDPSTIPRVEIAQEI
HVDGEINRARYMPQNPSVIAAKTNDSEVYVFDSSKHPLKHHGGSCCPDLRLRGHDQEGYG
LSWSPFKQGYLLSGSNDSKICLWDTSALPQDKILEPMFAYEAHEDIVEHVSWHSKNENLF
GSVGDDRRLMIWDLRSPLSNKPQHSIIAHEKEQVNYLSFNPFNEWILATASSDTTINLFD
LRKLTTALHSFSSHTEEVFQVEWSPNHETVLASSASDRRIMIWDLSRIGDEQSEEDAEDG
PPELLFSHGGHTAKISDFSWNENEPWVIASVSEDNILQIWQMAQSIYRDDMQADE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgggagaggagcaggtggcggaggagttctcagtgtggaagaagaacacaccattctta
tacgatcttgtgatctcccatgccttcgagtggccttccctcaccatccaatggctccct
acgccgtcccccgcccagaccacctcaacctcgaacaatactacatcatccttcgccgcc
cagagactcatccttgggacccatacctccgacaacgcccctaacttcctcatgatcgcc
gacgtacacctccctctttctcctacagcaaccaccatcaattcccaacacaacagtatc
gtggaaccatctccctctgatccctccaccattcctagggtggagatagctcaagagata
catgttgatggagaaattaatcgggctcgatacatgccccaaaatccatccgtcattgcc
gccaagactaatgattctgaggtctatgtctttgattcctccaagcaccctctgaaacat
catggcggttcttgctgtcccgatttgcgattgaggggccatgatcaagaagggtacggt
ctatcatggagccctttcaagcagggttacctcctcagtggctccaatgattccaaaata
tgcttgtgggatacatctgctttgccccaagataaaattcttgagcccatgtttgcatat
gaggctcatgaggatattgtggaacatgtttcgtggcattctaagaacgaaaatttattt
ggatcagttggggatgacagacgattgatgatttgggacttgcgatcgccattgtcaaat
aagccacagcattcaattatcgctcatgagaaagagcaggtgaattatctctccttcaat
ccatttaatgagtggattctggctacagcttcttcagatacaactattaatctgttcgat
ctacggaagctaacaactgcattgcatagtttttcgagtcacacagaggaggtattccag
gtagaatggagccctaatcatgaaacggtattggcatcttctgctagtgatagaaggata
atgatctgggacctcagcaggattggtgatgagcagtcagaagaagatgctgaggatggg
cctcctgagcttctcttttctcatgggggacacactgccaagatatcagatttttcatgg
aatgaaaatgaaccatgggtcattgcaagtgtatctgaagacaatatccttcagatctgg
cagatggcacagagcatttatcgtgatgacatgcaagctgatgaatag
DBGET
integrated database retrieval system
