Macadamia integrifolia (macadamia nut): 122074038
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Entry
122074038 CDS
T07436
Name
(RefSeq) protein CHROMATIN REMODELING 35-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
122074038
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ming03400
]
122074038
DNA repair and recombination proteins [BR:
ming03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
122074038
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
NosD
AAA_16
Motif
Other DBs
NCBI-GeneID:
122074038
NCBI-ProteinID:
XP_042494760
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All DBs
Position
3:complement(8468992..8484774)
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AA seq
1062 aa
AA seq
DB search
MGEKRSWSNSMAIRESRLLDRTSKAPYPVIGTFKQYSPESYSRSHKRMKISSDRKDSGSM
SWMARLRSKTKSKDGSTSQIVDFSDPFALPNWLEGLDRGKYGSVTKDIEDLLARNMQVLN
PLFARHPVLQRTGLDTFASLKGQPREVCESLNQQPHHFASHNIIDLDDDRIENDVPAYEN
SKPLHQHGGESAVFLPGGSSSIGPKLTNLPKDLQSQSDLPIVILDSDEEDGDSISTRHAS
GSKLVASNFGIPIGSENNGLCNPKNGVAVKANTGFFLHELQYQLGNNELLTEKLDQSNAI
EANRRPSYQYQEVVLRKAVEENPIRDLCVREFGEANIPNGERSGGNKVYRKEKGVHIGIQ
DDTMIEKSKVSRKEQGVYIGVQDDTMTEKSNHQNNEDDGLGDIWREMTFALECSKDATPE
SSAFEHSKGGEGEECNHSFVLKDDLGYVCRVCGIIERGIETIFDFQWIKGTKTTRTYIPE
SQSSKDRQQTEISLSGLEGSQEDLTVAEISVHPRHRQQMKPHQIEGFNFLQRNLVTDKPG
GCILAHAPGSGKTFMIISFMQSFLAKYPQARPLVVLPKGILATWRKEFQRWQVEDIPLYD
FYSSKADNRHQQLEVLKLWVDQKGILFLGYKQFANIVCGSATSKTAAACHDILLKVPTIL
ILDEGHTPRNENTDVLHSLAKVQTPRKVVLSGTLFQNHVKEVFNILNLVRPKFLKLESSR
PIVKRVLSRVHISGGRKFFKNGVESGFFELVEATLQNDEDFKRKVTVIQDLREMTNNVLH
YYKGDFLEELPGLVDFTVLLNLTSKQKNVVEKLKNMEKFKRSSVGSAVYMHPRLKEFSES
ATAGDRIGNISDEKIDDLLGKIDLKDGVKTRFFLNLLGLCESAGEKLLVFSQYLLPLKFL
ERLIVKMKGWSPGKEMFMISGDTNPEQREWSMDRFNSSPDAKVFFGSIKACGEGISLVGA
SRLLILDVHLNPSVTRQAIGRAFRPGQERKVYTYRLVAADSPEEEGHLTCFRKELIAKMW
FEWSECCGDRDFEMESIDTRECSDLFLESPLLGGDVKALYKR
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atgggcgagaagagaagttggtccaattccatggcaattagagagtcacggctactggat
cggacttctaaggctccctaccctgttattgggaccttcaagcagtacagtcctgaatca
tactccagaagccataaaagaatgaaaatatccagtgacagaaaagattctggcagcatg
tcctggatggcaagattgcgttctaaaaccaaatcgaaggatggaagcacttcacaaatt
gtagacttttctgatccatttgctttgcccaattggttggaaggtttggaccgtggaaaa
tatggaagtgttaccaaagatattgaggatcttcttgctcgaaatatgcaagtcttaaat
cctctatttgcaagacatcccgttctacaaagaactggtttagatacttttgcttctctc
aagggccaacctagagaggtttgtgagtcgttgaatcagcaaccccatcactttgcctct
cataatattattgatctggatgatgaccgcatagaaaatgatgttccagcatatgaaaat
tcaaaaccattgcatcaacatggtggtgaaagtgccgtgtttttacctggtggttccagt
tccataggtcccaagctaaccaatctacctaaggacttgcagagtcaatctgatctgcca
attgtaattcttgattcagatgaagaagatggagatagtatcagcaccagacatgcttct
ggctcaaaacttgttgcttctaattttggaattccaattggatctgaaaataatggtctt
tgtaatccaaaaaatggagtagctgttaaggccaataccggcttctttttgcatgagctt
cagtatcaactgggaaataatgagctgctgactgaaaaactagatcaaagcaatgccatt
gaagcaaataggaggccatcatatcagtatcaggaagttgtcttgaggaaggcagttgaa
gaaaatccaatcagggatctatgtgtgagagaatttggagaggcaaacattccaaacgga
gaaaggtctggtggtaacaaagtttatagaaaagaaaaaggtgtacatattggcattcaa
gatgatacaatgattgagaaaagcaaagtttctagaaaagaacaaggtgtatatattggt
gttcaggatgatacaatgactgagaaaagcaatcatcaaaataacgaagatgatggtctt
ggggatatctggagggaaatgacatttgcattggaatgttccaaggatgctactcctgaa
agttcagcgtttgaacacagcaaaggaggagagggtgaagaatgcaatcattcttttgtt
ctcaaggatgatctgggatatgtctgccgggtttgtggcattatagaaaggggaattgaa
acgatatttgacttccagtggataaagggcacaaagactacaagaacttacatacctgaa
tctcagagttccaaggacagacaacaaaccgagatttccctttctggacttgaaggatct
caggaagatctgactgtggccgaaatatctgtgcatccaaggcataggcagcaaatgaaa
ccccatcaaattgagggtttcaatttcttgcaaaggaatttagtaacggacaaaccagga
ggttgcattcttgcacatgctcctggatctgggaagacttttatgataataagttttatg
caaagtttcctggccaagtatcctcaagccagacctctggtggttctacccaaaggtatt
ctggctacatggaggaaagaatttcaaaggtggcaagtggaggacatacctttgtatgac
ttttattcttcaaaagcagataatagacatcagcagttggaagttttgaaattatgggta
gatcagaagggtatcttatttctgggttacaagcagtttgcaaacattgtttgtggtagt
gcgacaagcaaaactgcagctgcttgtcatgacatattgctgaaggttcctacgattctt
atattggatgaaggtcatacaccgaggaatgaaaacactgatgtgttacactcacttgcc
aaggtgcaaacaccaagaaaagtggttctttcaggcaccttatttcaaaatcatgtgaag
gaggtcttcaatattttaaaccttgttcgccctaagttcttaaagttggaatcttctcgt
cccattgtaaagcgtgttctgagtagggttcacatatcaggtggaaggaagttctttaaa
aatggtgtggaatcaggatttttcgagttagttgaagccactttacaaaacgatgaagat
ttcaaaaggaaggtaacagtcatacaagatctccgtgaaatgacaaataatgttcttcat
tattacaagggagatttcttggaggaattgccaggtcttgttgacttcactgtactttta
aatctgacaagtaaacagaagaatgtagtagaaaaattgaagaatatggaaaaatttaag
agaagttctgtggggagtgctgtttatatgcacccacggctgaaagagttctctgagtct
gcaacagctggagacaggattggcaacatcagtgatgagaagattgatgacttgttaggg
aaaatagatttgaaagatggggtcaagaccagatttttccttaatcttttgggcttgtgc
gaatctgctggtgaaaagctgcttgttttcagtcagtatctccttccactgaaattcttg
gaaagattgatagtgaagatgaagggttggagccctggcaaggaaatgtttatgatctct
ggtgacactaatcctgaacaaagggagtggtccatggaccgttttaacagttcccctgat
gccaaggttttctttggttcaatcaaggcatgcggtgaggggatctcccttgttggggca
tctcgtttactgattttggatgttcacctaaacccatcggtcacccggcaagctattggc
cgtgcattccgaccaggccaagagaggaaggtttatacatacagattggttgctgctgac
tctcctgaggaggaaggtcatcttacctgctttaggaaagaattaattgcaaagatgtgg
tttgaatggagtgaatgctgtggtgatcgagactttgaaatggagtctattgacacaaga
gaatgcagcgatttgttccttgaaagccctttgttgggtggagatgtgaaggctctatat
aaacggtga
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