Macadamia integrifolia (macadamia nut): 122074129
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Entry
122074129 CDS
T07436
Name
(RefSeq) E3 ubiquitin protein ligase RIN2-like
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122074129
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ming04121
]
122074129
Enzymes [BR:
ming01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
122074129
Ubiquitin system [BR:
ming04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122074129
Multi subunit type E3
ERAD complex
122074129
LMBR1L-GP78-UBAC2 complex
122074129
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
CUE
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_3
zf-ANAPC11
zf-RING_11
zf-C3HC4_4
zf-RING_16
zf-RING_5
PHD
zf-HC5HC2H
GCP_N_terminal
RING_XB3-XBAT31
RINGv
Prok-RING_4
zf-RING_Vps41
Endonuclease_7
zf_RING_Vps8
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
122074129
NCBI-ProteinID:
XP_042494923
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All DBs
Position
3:9035389..9057973
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AA seq
587 aa
AA seq
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MGVSYLSISALCTVLSLVGLQWWTESKLYQLKLDDPIGEDGIHSGNASRALELFLGSHVT
IALLANFVLNVFILVILCLKTIFFVQLYPSEARKVVERLINYVIYKGTFLPLVIPPTVFQ
AGMWFTWLTVLCSLKMFQALARDRLERLNASPSATPWTYFRVFSVFLLVLSIDFVGIQLC
LIIYKTLGSTMFLLLFFEPLGIAFETLQAIMVHGFQLLDIWHRQSAESSTDCQRSHIFDR
SAAGSLWEWKGILIRNFGFFLDMMTLLMALGHYLHIWWLHGMAFHLVDAVLFLNIRALAS
TIYKRIKGFVKLRIALSALHEALPDATSEEIQAYDDECAICKEQMAKAKKLSCNHLFHLA
CLRSWLDQGLSETYSCPTCRRPLFVVRPEENTNPHTGDVADNEQLAHQIGSGAEWQNTSG
HALPVGAFSNLQQNPSESFPWRGVGLDSSWVHPWPSQGLDGAGPSTAIRSVGLGRVQMMM
RQLTSVGENYAQTALEDAAWSLWPVTHPQAIPGAPVPSVPTSVRYAGNAGGLSFRSASPS
TNDNISSILAMADTVREVLPHIPDEIIFQDLRRTNSVAVTVNNLLQI
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtcagttacttatccatctcagcactctgtactgtgctaagcttggtagggctt
caatggtggacggaatccaaactataccaactcaagttagatgaccccattggcgaggat
ggcattcattcagggaatgctagccgtgcactagagctgtttttgggttcacatgtcaca
attgcgctcctagcaaattttgtgctcaatgtattcattttagtcattctctgtcttaag
actatattttttgtgcagctatatccatcagaggctcgaaaagtggtggaacgccttatt
aactatgtcatttacaaggggacatttcttccattggtaatccctccaacggtatttcaa
gctggcatgtggttcacatggttgacagttctttgttccttgaagatgttccaagcattg
gctagagaccggcttgaacggttgaatgcatctccttctgcaactccatggacatatttt
cgtgttttttcagtcttcttgttggttctctccatcgatttcgttggaatacagttgtgt
ctcataatttacaaaaccttgggttcaaccatgtttctgctgttgttctttgaaccactg
ggtattgcttttgagacgttgcaggcgattatggttcatggatttcagttacttgatata
tggcaccgtcagtcagcggaaagcagcacagattgtcaaagatcccatatttttgataga
tcagcagcaggttctttatgggaatggaagggcattcttattcggaattttggctttttc
ctagacatgatgaccttgctaatggcccttggtcattacttgcatatttggtggcttcat
ggcatggcattccatcttgtggatgcagtccttttcctaaatatacgtgctttggcaagt
accatatataagcggatcaaaggatttgtcaagctgaggatagctctaagtgctcttcat
gaggctcttcctgatgcaacttctgaagagatacaagcatatgatgatgaatgtgctatt
tgtaaagaacagatggcaaaggctaaaaagctatcttgcaatcacctttttcatcttgca
tgcttgcggtcttggttggatcaaggtctgagcgagacttattcctgccctacatgtcga
aggccactctttgtggtcagacctgaagaaaatactaatccccatactggagatgtcgcg
gataatgagcaacttgctcatcaaatcggttcaggagcagagtggcaaaacacatctggg
cacgcgcttcctgtgggggcattctcaaaccttcaacagaacccctcagaaagcttccca
tggaggggggtggggcttgattcaagttgggttcatccatggccaagccagggcctcgac
ggtgctggcccttctactgcaattagatcagttggactgggcagagttcagatgatgatg
agacaactaacatctgtaggcgaaaactatgcccagactgcccttgaagatgctgcttgg
agcctttggcctgtgacccaccctcaggctattccaggtgcccctgttccatctgttcca
acttctgtaagatatgctggaaatgctggtggtttgagttttagaagtgcgtctccctct
actaatgacaatatatcaagtatacttgcgatggctgacacagtacgggaggtgctgcct
catattcctgatgaaataatctttcaggacctgcggagaacaaattctgtagctgttact
gtgaataatcttcttcagatatga
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