Macadamia integrifolia (macadamia nut): 122074489
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Entry
122074489 CDS
T07436
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 42-like
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122074489
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ming03041
]
122074489
Enzymes [BR:
ming01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122074489
Spliceosome [BR:
ming03041
]
Complex A
U2 snRNP components
U2 related factors
122074489
Complex B
122074489
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
ResIII
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
122074489
NCBI-ProteinID:
XP_042495273
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All DBs
Position
3:4982320..4988403
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AA seq
1154 aa
AA seq
DB search
MDKVKNKSRREDSSDRKEDSKRSDRNRDRERDKERNEDRYRDKERASDRDSEKKDRESRR
SVRERSVDDRYREKHRDKYREKEKDRGWHRDEERERTKERVKDKETEKERGRHREKDREK
EREREREERERERDRERQIREKELEKEEREREKLWAREREERERTREREKRRELDRDEEK
DADESRGHDRKKRKRNDDYREREWERSSSRSDRDKDDNDDSRRKRSEDYSENKEKRSWEE
DLEEEQRKLDEEMDKRRRRVQEWQELKRKKEESERENLGEANADVQKSSKNWTLEGESDD
EDVVFTVKSEKDMDMDEDGKSAGESGDAMVVDSENGTAVAGTQNGGEEANGDEEIDPLDA
FMNSMVLPEVEKLNGSESSSKLDNKKSDPKKHQKDGQTNGVQSKRVTNKAMGRIIPGEDS
DSDYSDNENDEVPREDEDDVEFMKRVKKTKVEKLSVVDHSKIQYPPFRKNFYIEVKEISK
MTDEDVATYRKLLELKIHGKDVPKPVKTWNQTGLTSKILDTIKKLNYEKPMPIQAQALPI
IMSGRDCIGIAKTGSGKTLAFVLPLLRHIKDQPPVVPGDGPIGLVMAPTRELVQQIHSDI
KKFAKMLNVNCVPVYGGSGVAQQISELKRGAEIVVCTPGRMIDILCTSGGKTTNLRRVTY
LVMDEADRMFDMGFEPQITRIVQNTRPDRQTVFFSATFPRQVEILARKVLNKPVEIQVGG
RSVVNKDITQLVEMRSDGERFLRLLELLGEWYEKGKILIFVQSQEKCDSLFRDLLKHGYP
CLSLHGAKDQTDRESTISDFKRNVCNLLIATSVAARGLDVKELELVINYDVPNHYEDYVH
RVGRTGRAGRKGCAITFISEEDARYAPDLVKALELSEQAIPADLKAFADGFLAKVNQGLE
HAHGTGYGGSGFKFNEEEDESRKAAKKAQAREYGFEEDKSDSDSEDEGIRKAGGDISQQA
QLALAQVAAIAASSRITVASMPIPVSAAPSLLNGGLPVSPPGAGLGIPGTASVVPGATLP
IGPGDGAARAAALAAAMNLQHNLAKIQADALPEHYEAEFEINDFPQNARWKVTHKDTLGP
ISEWTGAAITTRGQYYPPGRVPGPGERKLYLFIEGPTEQSVKRAKAEVKRVLEDFTNQSL
SLPGTAQPGRYSVL
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atggataaggtgaaaaacaaatccaggagagaggattcatcagataggaaggaggattcc
aagaggagcgaccggaaccgtgacagagaaagggacaaggaaagaaatgaggacaggtac
agagataaggagagggcgagtgatcgtgattctgagaagaaagacagggagagtcggcgc
tcggtgagggagaggagtgttgatgacagatatagggagaagcacagggacaaatacagg
gagaaagagaaggatagaggttggcatcgagatgaggaaagagagaggacaaaagagagg
gtgaaagataaggagacggagaaagaaagggggaggcatagagagaaagacagggagaag
gaaagggagcgagaaagggaagaacgagagagggagagagatagagaaaggcagatcaga
gaaaaggagctggaaaaagaggagagagaaagagaaaagctgtgggcaagagagagggag
gagagggagaggaccagggagagggaaaagcgtcgggagcttgatagagatgaggaaaaa
gatgcagatgaaagcaggggccatgacagaaaaaagcgtaagaggaacgatgattatagg
gagagagaatgggaaaggagcagcagccgatcagatagggacaaagatgacaatgatgat
agccgaaggaaaaggagtgaggattattctgagaacaaagagaagagaagctgggaagaa
gatttagaggaagagcagaggaaacttgatgaggaaatggataagcggaggaggagggtt
caggaatggcaggaattgaaaaggaagaaggaagaatctgagagagaaaacctgggagag
gcaaatgctgatgtccagaaatccagtaagaactggaccctggaaggggagtctgatgat
gaagatgttgtttttacagtgaaatctgagaaggatatggacatggatgaagatggcaag
tccgctggtgaaagtggagatgctatggtggttgactctgaaaatgggactgctgtagct
ggcacacaaaatggaggtgaagaagccaatggggatgaggaaatagacccattggatgct
ttcatgaattcaatggtattgcctgaagttgagaagctgaatggctcagagagctcctct
aaattggataataaaaagtcagatcctaagaagcatcagaaagatgggcaaactaatggt
gttcagtccaaaagggttacaaataaagctatgggaaggatcatccctggtgaagattct
gattctgattatagtgataatgagaatgatgaagttccacgtgaagatgaagatgatgtt
gagttcatgaaaagggtgaagaagactaaggttgaaaaattatctgtagttgaccactca
aagatccagtatccccctttcaggaagaatttctatattgaagtgaaggagatctcaaag
atgacagatgaggatgttgctacctacagaaaactacttgagttgaagattcatgggaaa
gatgtgccaaagcctgttaagacatggaaccagactggattgactagtaaaatattggat
actataaagaaactaaactatgaaaagccaatgcccatccaagcccaggcactgccaata
attatgagcggtcgggactgcattggtatcgcaaaaactggatctggtaaaaccctggct
tttgttttgccactgttgaggcatatcaaggatcagccacctgttgttcctggagatggg
cctattgggcttgtaatggctcctaccagagagcttgtccagcagatccatagtgatatc
aagaagtttgcaaagatgcttaatgttaactgtgttcctgtctatggaggctctggggtt
gcccagcagataagtgaattaaagagaggtgctgagattgttgtctgcactccagggagg
atgatagatatactttgtacgagtggaggaaagactactaatctccgaagagttacatac
ctagttatggatgaagcagatagaatgtttgacatgggatttgaacctcagattactcgg
atcgtccaaaatacccgaccagaccgacagactgtatttttttcggctacttttcctcgt
caggttgagatactggctcgtaaagtattgaacaagcctgtagaaatccaggttggggga
aggagtgttgtgaacaaggatataacgcagttggttgagatgagatcagatggtgagagg
ttcttaaggctgctagaactactgggagagtggtacgagaaagggaaaatattgatattt
gtccagtcacaagagaaatgcgattctttatttagggacttgctaaagcatggttaccct
tgcctatcccttcatggagctaaggatcagactgatcgcgagtcaaccatttctgatttc
aagaggaatgtctgcaatctcttgattgcaactagtgtcgctgcgaggggcttggatgtg
aaggagcttgagctggtaatcaattatgatgttccaaaccactatgaagactatgtgcat
cgtgttggtcggacaggtcgtgctggccggaaaggctgtgctattacctttatctctgaa
gaggatgcaagatatgctccagatcttgtaaaagctttggaactctctgagcaagctatt
cctgctgatctgaaggctttcgctgatggatttttagcgaaagtgaatcagggacttgag
catgctcatgggactggttatggtggcagtggttttaagtttaatgaagaggaagatgaa
tcgaggaaagctgctaagaaagcacaggcaagagaatatggttttgaggaagacaagtca
gattcggactctgaagatgaagggattcggaaggctggaggtgacatctctcagcaagcg
cagcttgcgcttgctcaagttgctgccatagctgcatcctccaggataactgtagcttca
atgccgatcccagtctcagcagccccatcattgctgaatggaggactacctgtatctccc
cctggtgccggtttgggtataccaggcaccgcatcagtggtacctggggcgactctgccc
attggaccaggtgatggagcagctcgagcagcggcattagcagctgctatgaatctgcag
cataaccttgcaaaaatccaggctgatgcactgcctgaacactatgaagcagagtttgag
atcaacgattttcctcagaatgctcgatggaaggtgactcacaaggacactttgggtcca
atctcggaatggactggggctgctataactaccagggggcaatattatccaccaggtagg
gtcccaggacctggggagcggaagctctatttgttcattgagggtcctactgaacagtct
gtaaagagggcaaaagcagaagtaaagcgtgttctggaggacttcacgaaccagtcattg
tcactgcctggtacagcccagccgggcaggtactctgtcttgtga
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integrated database retrieval system
