Macadamia integrifolia (macadamia nut): 122075263
Help
Entry
122075263 CDS
T07436
Name
(RefSeq) polyadenylate-binding protein 2-like
KO
K13126
polyadenylate-binding protein
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming03015
mRNA surveillance pathway
ming03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122075263
09123 Folding, sorting and degradation
03018 RNA degradation
122075263
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ming03019
]
122075263
03041 Spliceosome [BR:
ming03041
]
122075263
Messenger RNA biogenesis [BR:
ming03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
122075263
mRNA cycle factors
Stress granule specific factors
122075263
Spliceosome [BR:
ming03041
]
Complex C
Other components
Complex C specific factors
122075263
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_5
RRM_10
RRM_occluded
RRM_Nup35
RRM_7
RRM_3
RRM_MARF1
Motif
Other DBs
NCBI-GeneID:
122075263
NCBI-ProteinID:
XP_042496164
LinkDB
All DBs
Position
4:complement(25436961..25450124)
Genome browser
AA seq
657 aa
AA seq
DB search
MAQVQVQPQAPPSGPNAAGNTGANPYVSTSLYVGDLELNVTDSQLYDLFSQLGQVVSVRV
CRDLSTRRSLGYAYVNYSNTQDAARALDALNFTPLNGKSIRIMYSHRDPSIRKSGTANIF
IKNLDKAIDNKALQDTFSVFGNILSCKIATDPSGQSKGYGFVQYDSEESAQNAIDKLNGM
LMNDKQVYVGPFLRKQERESALTKTKFNNVYVKNLSETTTEEDLKNLFGEYGPITSVVVM
RDADGKSKCFGFVNFENTDDAAEAVDGLNGKKFDEKEWYVGKAQKKSEREQELKGRFDQS
VKEAVDKYQGVNLYVKNLDDSIGDEKLKEMFSEFGTITSCKVMRDPNGISRGSGFVAFST
PEEASRALAEMNGKMLVSKPLYVALAQRKEDRRARLQVQFSQMRPVAMPPSVTPHVPMYP
PGGPGIGQQIFYGQGPPALIPPQPGFGYQQQLVPGMRPGGAPMANFFVPMVQQGQQGQRP
GGRRAGAGPVQQNQQPVPLMQQQMLPRGGRMYRYPPGRNMPDVPMPAGVAGGMLSMPYDM
GGMPLRDATMSQPIPISALASALANATPEQQRTMLGESLYPLVDQLEHEMAAKVTGMLLE
MDQTEVLHLLESPEALKAKVAEAMEVLRNVQQQQQQQQASSPTDQLASLSLNDNLVS
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaggttcaagttcagcctcaagctcctccttctggcccaaatgcggcgggcaat
actggggctaacccatacgtttcgacgtctctgtatgtgggtgaccttgaattgaacgtg
acggactcgcaactttacgatctgttcagccagcttggtcaggtcgtgtcggttcgtgtt
tgcagagatttgagcacccggcggtcccttggctacgcgtatgttaactacagcaatacc
caagatgctgcaagggcattggatgcacttaacttcactcctcttaatgggaagtccatt
cgcataatgtattctcaccgtgatcctagcatccgtaaaagtgggacagctaatatattc
attaagaacctggataaggcaatcgacaacaaggcactacaggatacattttctgtgttt
gggaacattttgtcttgcaagatagcaacagatccttctggccagtcaaaaggctatggg
tttgttcagtatgatagtgaggaatcggcccaaaatgccatagacaaacttaatggcatg
ctgatgaatgataaacaggtttatgttggaccctttcttcgtaagcaggagagagaatct
gcattgactaagacaaaattcaacaatgtttatgtaaagaatctctcagagacaacaact
gaagaagatctgaagaacctttttggcgaatatggaccaataactagtgtggtggtaatg
agggatgcagatggaaaatccaagtgttttggatttgtcaactttgagaatacggatgat
gctgctgaagctgttgatggtcttaatggaaagaaatttgatgaaaaggagtggtatgtg
ggcaaggcacagaagaaatctgaaagagaacaagaactgaaaggtcgatttgatcaaagt
gtaaaggaggcagtagacaaatatcaaggggtaaacttatatgtgaagaacttagatgat
agcattggcgatgagaagctaaaggaaatgttctctgagtttggtacaattacatcatgc
aaggttatgcgagatcctaatgggattagtagaggttcaggatttgttgctttctctact
cctgaagaagcatcacgagctcttgctgaaatgaatggcaaaatgcttgtaagcaaacct
ctctatgttgcacttgcacagaggaaggaagatagacgagcaaggctgcaggtgcaattt
tctcaaatgcggcctgttgctatgccaccttctgttactcctcatgtgccaatgtaccct
cctggtggtcctggtattggacaacaaatattttatggtcagggtccccctgctctgatt
cctcctcagcctggatttggataccagcagcaactagttcctgggatgaggcctggtggt
gctcccatggccaatttctttgtgccaatggttcagcaaggtcagcagggtcaacgacca
gggggcaggcgtgcaggggcgggaccagtgcaacaaaatcaacagccagtgcctctgatg
caacagcagatgcttccaaggggaggacgcatgtaccggtacccgccaggtcgtaacatg
cctgatgttcccatgccagcaggggttgctggtggcatgctttctatgccatatgacatg
ggcggcatgccattgcgagatgctacgatgtcacagcctattcctattagtgctttggct
tctgctcttgcaaatgcaacacctgaacaacagagaacgatgctgggtgaaagtctgtac
ccgctggttgatcagctagagcatgaaatggcagctaaggttacaggaatgcttttggag
atggaccagactgaggtcttgcacttgcttgaatcaccagaagctctgaaagcgaaggtt
gcagaggccatggaggttctgaggaacgttcaacagcagcagcagcagcagcaggcaagc
agtccaactgaccaactggcttccttgtcactgaatgacaaccttgtctcttga
DBGET
integrated database retrieval system
