Macadamia integrifolia (macadamia nut): 122075293
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Entry
122075293 CDS
T07436
Name
(RefSeq) protein RST1-like
KO
K27498
focadhesin
Organism
ming
Macadamia integrifolia (macadamia nut)
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ming03019
]
122075293
Messenger RNA biogenesis [BR:
ming03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
122075293
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF7746
MP
gag-asp_proteas
Asp_protease_2
RVP
SdrD_B
Motif
Other DBs
NCBI-GeneID:
122075293
NCBI-ProteinID:
XP_042496197
LinkDB
All DBs
Position
4:complement(7542077..7573431)
Genome browser
AA seq
1678 aa
AA seq
DB search
MGRDADELAGMYLSEHERSRYFLSPDVQKPPAINKSMKGLSASIAKEQQEKTPLTNELVK
SWPYIDKDNFIPYALEEQMKTGTVNLVAECDHDPNEINDGDSDGEPRPFYVICPLLTTQN
IPKEDDWRHNSIFQTRVLCNDSLCNMMIDPGSCTNVIVEDAIRKLGLKTEPHPNPYKTTN
LNRQLQRWDMPKVSRKEIYDRDWTSWETIKTVELTINFTPETKEITLFDPNSLQGLYTKN
KFNYVHIGLVQVAIKPLHREGLNTSLLSALRDQRFLEFNDSLLGAIEASLCYGPVHFNVY
PNMSVALEDPNIRHSFKINLKTHGYKLMHGSIPISIIHRIKYKAIKTVRPRALRTSPKGQ
TLYLETDCMHGQIVYPKLVQWKDISFPEEWQMQTTTIPPQISNTNIQSITQDLDGLVSIR
FDRRPPPPVYQTSRRSCSDVSSSSQKDVTTRVPINDWIPPLRTPPHYSNLSGLYQTQNIV
HGTYNVSSSVSEPTHSEQQQTNQNQSQSPTPSDVAPPEQSSGVYMIQDDQEYQIDKPFLR
NDFESPKHKEKQAPQTPVQSQPTVESAIRNGGILTLEGYSSDSSSDSESDVFPQINQIGQ
SSTQNPTFPDLQIEARGKPAQASYQSGIIYEWNIDGLSEHNLMNKLQEMTMVSNAHRIQN
TEDSAVATLLISGFTVQLKGNPSRLKDRTAEQLSNLRCKKLHDFKCCEDCAPKSVRMLRA
SPNSNIFDYIDNLTDPEQKKAFDSGANANCINKGAIPTQFYERTTQRLNTANGSGLNVQY
KLSNTHYFQVLPPSAHAITATASKFLLKWLFQYEHEYRQWSAAIALGLVSRFLHATDRKP
KFQIIAGLLEVALGSKNTLVKGACGVGLGFTCEDLSSTVTASDDSDLEGKTDRVKEANLL
GKIVRTISLMICQHVPSSSDSLQSLLEYFPLDPNDNDTYIGPDLSSNNHENLGEDLWGVA
GLILGLGNSISAIYRYGAHDAVLKIKSLFISWIPCLNAAIRNPCGDREDPEIPLSVGSCL
ALPIVVAFCQRVELIGESEVDHLVAGYKELIGELLSLKKSGTFHQSLLMASCIGAGSFVS
CILSEGVHPIKVEDVMSLLEMLRKCYTCPYPPIVYLGGMLGVVNVLGASAGTLTFVYPQP
PLRTGYGQKDSCYIREPILASPVCEPQLSSLVQEIFLVSRDSKDQQLQRYAAWALAFLRH
RWWSKELQTAKHGSQSNQIDSGNVSQSFPEDSVVWKLCMWLMNLNSIGEGTTAHVNTVAT
VLRSLSRAPRLPSLDWGVIIRRCMRFGDQISGNLCPDPAVQKVTLREDCILFSLAHANQI
NPLLLFLDELSDLSRFRTLELNLQLILLCHLADLSKIFSVSRLEKLFDDMADYIRSPVSS
YHAYNSDQKSLLRISFWKGLNQCLDQAFAESQEYVTNMEKCMEFLFASLPVLPFDATIRL
EQANCMDEWSEGVTCLGKAPRRWLMDLLEVPEGGMVQGSHFTELVKRIQARTKLVMIGSI
PLTELGKLKASILNTESDGIWDVLVEVAAALQCADGGIKRQWLIDVVEISCITKYPSTAL
QFLGLLSGSWCKYMPLLILDPISVLSDLPVTLPSLLSDSSWNFVAESVVLNLWALMERIC
DWSTSLGSGSDVFRPQDIDKSEDGMAVLLMRVMHHIFVSLLEYLPFQKQLKLANLMVP
NT seq
5037 nt
NT seq
+upstream
nt +downstream
nt
atgggacgagatgcagatgagttggcaggcatgtacctatctgagcatgaacgaagcagg
tacttcctttcaccagatgtccaaaagccacccgcaattaacaagagcatgaagggatta
tcagcgtctattgcaaaagagcaacaagagaagacacctttgaccaatgaactagtcaaa
agttggccatacatcgacaaggacaattttataccctatgcacttgaagagcaaatgaaa
acaggaacagtaaatctggtggctgaatgcgatcatgatcctaatgagattaatgatggt
gatagtgatggtgagcctcgaccgttctatgtgatatgtcctcttttgactacacaaaat
attcctaaggaggatgattggcgccataacagtatctttcaaaccagggtgctatgcaat
gatagtttgtgtaatatgatgattgaccccggtagttgtaccaatgttattgttgaagat
gctattcgcaagttgggtctaaaaactgagcctcatccgaatccctacaagaccacaaat
ctcaaccgtcaacttcaaagatgggatatgcccaaagtatcccgcaaagaaatttacgac
agagattggacttcttgggagaccatcaaaactgttgaactaaccattaactttactcca
gaaacaaaagagatcacacttttcgatccaaactctttacaaggactatatactaaaaac
aaatttaattatgtccatatcggcctcgttcaagtggccatcaaaccccttcaccgtgaa
ggactcaacacatctttgctgtcagcccttcgtgaccaaaggtttcttgaattcaatgat
tcccttttaggagccattgaagccagcctttgctatggaccagtacacttcaatgtttac
ccaaacatgtctgtagcccttgaggacccaaatattcgtcattctttcaaaatcaacctc
aaaacccatggatacaaattgatgcatggatccattcctatttccatcatccatcgaatc
aaatacaaagctataaaaactgttcgacctcgtgcccttcggacttctcctaaaggccaa
accctttaccttgaaactgattgtatgcacggtcaaattgtttatcccaaacttgttcag
tggaaagacatctcttttcctgaggaatggcaaatgcaaactactaccattccacctcaa
atttcaaataccaatattcagtctatcacccaagacttggatggtttagtttccattcgg
ttcgacagaaggcctcctcctcctgtctaccaaacctccagaagatcgtgttctgatgtt
tcgtcttcctcccagaaagacgtaacaaccagagtacctattaatgattggattcctcct
cttaggactccacctcattattcaaatctctctgggctttaccaaacccaaaatattgtc
catggtacctataatgtttcatcatctgtatctgaaccaacccactctgaacaacaacaa
actaatcaaaatcaatcccaatccccgactccttctgatgttgctccacccgagcaaagc
tctggagtctacatgattcaggatgatcaggaataccaaattgacaaaccttttcttaga
aatgattttgaatcaccaaaacacaaagaaaaacaagcccctcaaacaccagtccaaagc
caaccaaccgttgaatctgccattcgtaatggtggtattctcacccttgaaggatattct
tcggattcatcttctgattctgagtccgatgttttccctcaaattaatcaaattggtcaa
agttccacacaaaacccaactttcccagaccttcaaattgaagcaagaggaaaacccgct
caagcttcttatcaaagtggcatcatctatgagtggaacatagatggtctgtccgaacat
aatctcatgaacaaattacaggaaatgactatggtcagcaatgcacaccgtattcagaat
actgaagatagtgcagttgctactttacttatttccggctttactgtccaactcaaaggt
aatccttctcgtctcaaagatagaactgctgagcagttatcaaaccttagatgcaaaaaa
cttcatgatttcaaatgctgtgaggattgtgctcccaaatctgtccggatgcttcgtgca
tcacccaattcaaatatttttgattatatcgataatttgacagacccagaacaaaagaag
gcctttgattcaggagcaaatgctaattgtatcaacaaaggtgccattccaacccagttc
tatgaacgaacgacccaacgcctcaacacggctaatggatctgggttgaatgtccaatac
aaactctcaaatacccattatttccaggttttgcctccatctgctcatgcaataacagca
actgcatcaaaattcctactgaagtggttgtttcaatatgaacatgaatacaggcaatgg
tctgctgcaattgcgctaggtttggtctctcgttttttacatgcaactgatcgcaagcca
aaatttcagatcattgctggacttcttgaggttgctcttggtagcaagaatactcttgtc
aaaggagcctgtggggttggcttaggttttacttgtgaagatctctctagcacggttaca
gcttctgatgattctgacttggaaggaaaaactgacagggtgaaggaagccaacttactt
ggaaaaattgttaggactatatcactgatgatatgccagcatgttccttcttcatctgat
tctttgcagagcctcttggaatattttcctttggatcctaacgataatgatacatacata
ggtcctgacttatccagtaacaaccatgaaaacctgggggaagatttatggggtgttgca
ggactcattttgggtctaggaaattccatcagtgcaatatacagatatggggcacatgat
gctgtgctcaagataaaatccttgtttatatcatggattccttgtttgaatgctgcaatt
cgtaatccttgtggcgacagggaagatcctgagataccattatctgtgggatcctgtctt
gcacttcccattgtagtggccttttgccagagagtagagcttattggtgagagtgaagta
gaccatttagtcgctggctacaaggagctaataggtgaacttttgtctctgaagaaatct
ggtactttccatcagagtttgttgatggcttcttgtattggagctggaagctttgtctca
tgcattttgagtgaaggtgtgcatccaatcaaagttgaagatgtgatgagcttactagaa
atgcttagaaaatgttatacatgcccataccctcccatcgtgtatttaggtgggatgctt
ggagttgttaatgtattgggtgcaagtgcaggaactctgacttttgtgtatcctcagcct
cctctacgaactggttatggacaaaaggattcgtgttatatcagggagcctatactagca
agtcctgtttgtgagccacaattgtcatcattggtgcaagagatatttttggtttcacgg
gattctaaggatcagcagctccaaagatatgcagcatgggcacttgcatttctgagacat
cgttggtggtctaaggaactccaaactgcgaaacatggttcccagagtaatcaaattgat
tctgggaatgtttcacaaagctttccagaggacagtgtggtctggaagctctgcatgtgg
ttgatgaatctcaactctattggggaaggtactaccgcacatgtaaacacagtggcaacc
gttctaaggagcttgtcacgagctccccgattaccatccttggattggggagtgatcatt
cgacgctgcatgagattcggtgatcaaatttctggcaacctatgcccagatccagctgtt
cagaaagtaacgcttcgagaggattgcatactgttctcattggctcatgcgaatcaaatt
aatcccctcctacttttcctggatgagctttctgacctctctaggttcaggacacttgaa
ttgaatctgcagttaattttgctctgtcatctggctgacctgtcaaaaatcttctcagtt
tctaggctggagaaactttttgatgatatggctgactatatacgttctccagtgtcttca
taccatgcctataactcagatcagaaaagtctgttgcgaatttcgttctggaagggcctg
aaccagtgtcttgatcaagcatttgccgagtctcaggagtatgtaacaaatatggagaag
tgcatggagtttttgtttgcttcattgcctgtgttgccttttgatgccaccataagactg
gaacaggcaaattgcatggatgagtggtcagagggggttacctgtcttggaaaggctcca
aggcggtggttaatggatcttctggaggttccggaggggggtatggtacaaggaagccac
tttactgaacttgtgaaaagaattcaagcaagaaccaagctagttatgattggttcaatt
ccactgactgagcttggaaaactaaaagcatccattctgaacacagaatcagatggtatc
tgggatgtactagtagaagttgctgctgctctacaatgtgcagatggaggaatcaaaaga
cagtggcttatagacgtggtagagattagctgtataactaagtatccttccacggcacta
cagtttcttggcttgctgtctggcagctggtgtaaatatatgcctcttctgattctggat
ccaatttctgtgttaagtgacttgccagtcacactgccttctcttttgtcagacagcagc
tggaattttgttgcagaatctgtagtattgaatctatgggcattgatggaacgcatttgt
gactggtccacaagcttaggaagtggcagtgatgtctttaggccgcaggatatcgataaa
agcgaagacggaatggctgttctactcatgcgtgtaatgcatcacatctttgtttcttta
ctagaatatttaccattccaaaagcagttgaagcttgctaatttgatggtcccttga
DBGET
integrated database retrieval system