Macadamia integrifolia (macadamia nut): 122075959
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Entry
122075959 CDS
T07436
Name
(RefSeq) SNF2 domain-containing protein CLASSY 1-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
122075959
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ming03400
]
122075959
DNA repair and recombination proteins [BR:
ming03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
122075959
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SAWADEE
ResIII
Motif
Other DBs
NCBI-GeneID:
122075959
NCBI-ProteinID:
XP_042497125
LinkDB
All DBs
Position
4:6886..15927
Genome browser
AA seq
1371 aa
AA seq
DB search
MAKRHLYRNRHPFDIHPFEAFSHGSWRTIEHIRIRDGTVAMRFETPGFEMDEEVYNGTVR
VRSRKAILSDCDCFLRAGIDVCVLLTDPTKDKKFPQSVRIDARINSIERRPHEPQCTCRF
NVTFHTTHRRNGKLCKGIRDVGIDDIAIIQRLQRKPCEDGYHRWSYSQDCPSAVESKLFR
GQFSSDISWLLVTSIWKGLKFDLRSVQSKIVYQILYGDDHDVCSSDTANNVAINFQMDNG
IIRPFTRTFIPVDTFVSGSSIEACPVHDLQEDDSLQLYDPMELRRSKRRNVQPERFVSYR
GFSKPKPSIVETEEDKINGWKENRTLSIILHQADNVHLMHSESFRRSIGGEMIIEDCNGE
NMIEDSAGENFVEYSMCENMVEDSEVYYRKKSPVNQSNVKSRDFMSGADTRMKNKILLLE
NHEMDGGTAAPYGRPKADNGLFSGDSHFSFPVYASRKNKRKLKSPISNCTVSTPRVSSDI
PLTSESVSLLHPQDYPPIQIIGNPQKMVSWVFSEHSHRHGSSVMGEKTLLRKRFEEMQEK
RCRKMEVTWKVKGSNKKHLRRVSNLFCSKRDRSGETRTRRNAFLSTSEYKKMIDRFMKNI
ESEIKREHPHAAAQWEAMRGMNCSNQRWRDKCTPVLNDQTENSELELLWKEMEFSMATVN
FIGDSQGSRLDTCDEVAKKSSKDYGHSCHHEFKMDEEVGLVCKLCSFVSTEIRDVSLPFF
QNTGWIAKKYLHDEELRWATAGHEGQDIFGNPGSSEEIPLSKRSDNVWAMIPELRMKLHS
HQKKAFEFLWKNIVGSLIPAEMEQCSKRTGGCVISHSPGAGKTLVIIAFLESYLKMFPGK
RPLILAPKTTLYTWYKEMKKWDVSFPVYQIHVRANFRHGILNHEVEEPVGDRRPNLFDQH
VMDCLEKIQKWHEHPSILLMGYTSFLTLTRDGSKYEHRRYIGRILKRSPGILVLDEGHNP
RSTKSRLRKALMKVKTDLRILLSGTLFQNNFSEYFNTLCLARPVFVYEVLRKLNPNTKYR
KERKCYNSMETLARRFFTEKIAKKIKSKLVEERRRGLSRLRKITKGFIDVYEGGVQDSLP
GLQSYTLLMKSTVIQQDLQTRLQNQKVAYKGYPLELELLITLGSIHPWLITTVACADKYF
TMEELQDLKKHRLDLKKGSKVRFVVSLVQKCIMKMEKVLIFAHNIAPISLFVEIFEMIFG
WQMGEEILVLQGDQELYERARVMDKFEESDGPSRVLLASITACAEGISLTAASRVVLLDS
EWNPSKTKQAIARAFRPGQERIVYVYQLLASGSLEEEKYGKTTWKEWVSSMIFSEAIVDD
SSHKQVENIDDDVLREIVEDDQAELFHTIMKHDKLSNGLDRGKAAEIFLGK
NT seq
4116 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagagacatttgtatcggaatagacatccatttgatatacaccctttcgaggca
ttttctcatggttcatggaggactatagagcatatcagaattcgggatgggacagttgcc
atgcgttttgaaactcctggatttgagatggatgaggaagtctataatggcactgtacgc
gtacgatctcgaaaagcaatcttatctgattgcgattgtttcttgagggctgggatagat
gtatgtgtacttttgacagatccaaccaaggacaaaaaatttccacaatcggtccggatt
gatgctagaataaattcaattgagaggaggccacatgaaccacaatgcacctgccggttt
aatgtaaccttccatacaacacatcgtcggaatggaaaactttgtaaggggatcagggat
gtgggaattgatgatattgcaataatacaacgactgcagagaaaaccttgtgaagatggg
tatcaccgatggagctattctcaggactgcccttctgcagttgaatctaaattgttccgg
ggtcaattctcttcagatatttcatggctacttgttacctccatttggaagggactaaaa
tttgatttaagatcagtgcagagcaagattgtctatcaaattttgtatggtgatgatcat
gatgtgtgttcttcagatactgccaacaatgtagccataaatttccaaatggacaatgga
attattagaccatttaccaggacttttattcctgtagatacatttgtttcaggtagttcc
attgaggcttgtcctgttcatgatctgcaggaagatgactcattgcagctttatgatccc
atggagttgcggcgttccaaacgcagaaatgttcaacctgagcgttttgtaagttacaga
gggttttcaaaaccaaagccttctattgttgagacagaggaagacaagataaacggatgg
aaagagaacagaacattgtccataatattgcatcaggcagataatgtccatttgatgcat
agtgagtctttcagacggtctattggtggtgaaatgataattgaagattgcaatggtgaa
aatatgatagaagatagtgcaggtgaaaattttgttgaatatagtatgtgtgaaaatatg
gttgaagatagtgaggtttactacaggaagaagtccccagtgaatcaaagcaacgtcaaa
tcaagagactttatgtcaggtgcagatactagaatgaaaaataaaatattgcttcttgag
aatcatgagatggatggaggtactgctgctccttatggtagacccaaagcagacaacggc
ttgttttcaggagattcacacttttcattcccagtttacgcatcacggaaaaacaagaga
aaattgaagtctcccatcagcaactgtactgtttccaccccaagagtttcctccgatatt
cctcttacatctgaaagtgtttctctgttgcatccacaggattatcccccaattcagatt
attggaaacccccaaaaaatggtttcttgggttttttctgagcatagtcataggcatgga
tcatctgtaatgggagaaaaaactctattgcggaaaagattcgaggaaatgcaagaaaaa
agatgcagaaaaatggaagtaacatggaaggtgaaaggttcaaataagaagcatctaaga
agagtaagtaacctattctgctcaaaaagagataggtctggtgaaacaagaactaggaga
aatgccttcttaagtacaagtgagtacaagaaaatgatagacaggtttatgaagaacata
gagtctgagatcaagagagaacacccacatgctgctgctcagtgggaagcaatgcgggga
atgaattgttcaaaccaaagatggcgtgacaaatgcacacctgttcttaatgatcagaca
gaaaactcagagcttgaacttttgtggaaagaaatggagttttcaatggcaacagttaat
tttattggagacagtcagggatcaaggctggatacctgtgatgaggttgccaagaagtca
agcaaagattatggccattcgtgccaccatgaatttaagatggatgaagaagttggactt
gtatgcaaattatgcagctttgtgagcactgaaataagagatgtttcactgccatttttt
caaaatacaggttggattgcaaagaagtatcttcatgatgaagaattgaggtgggccact
gctggacatgagggtcaagatatttttggcaatcctggttcttcagaggaaataccatta
tcaaaaaggagtgacaatgtttgggccatgataccagaattgagaatgaagttacactcc
caccaaaagaaagcttttgaatttctatggaagaacattgtcgggtctttgatacctgct
gagatggaacaatgttccaaaagaacaggtggttgtgtaatctcacactctccaggagct
ggaaaaactctggttataattgcattcctcgaaagctacttgaaaatgttccctggaaaa
cgaccattaatccttgctccaaagaccactctatacacctggtacaaagaaatgaagaag
tgggatgtatcatttccagtttaccaaatccatgttcgggcaaacttcaggcacgggatt
cttaatcatgaagtggaagagcctgtgggtgatcgcagacccaacctatttgatcagcat
gttatggactgcctagagaaaattcaaaaatggcatgaacacccaagtattttgctcatg
ggatacacctcctttctaacattgacacgagatggatcaaagtacgaacacaggaggtat
attggtagaatcttgaaacgaagcccaggaattcttgttcttgatgaaggccacaaccca
aggagtactaaatcaaggttaagaaaagctctaatgaaagtgaagacggatttgagaatt
ttgctttcagggacactgtttcagaataatttcagtgagtatttcaatactctctgcttg
gctagaccagtctttgtctatgaggtgttaaggaaactgaacccaaacacaaaatatcgg
aaggagaggaaatgctacaattcaatggagacattggctagaagatttttcacagagaag
attgcaaaaaaaataaaatcaaaattggtggaagaaagaaggcgtggcctgagcaggttg
aggaaaattacaaaagggtttatagatgtatatgaaggtggagttcaagactcactccca
ggattacaaagttacacacttttgatgaaatcgacagtcatccaacaagatcttcaaact
agactacaaaaccaaaaagttgcatacaaaggatatcctctagaactggaattgttgatt
actcttgggtccatacatccttggcttatcacaactgtggcatgtgctgataaatacttc
accatggaggaactacaagaccttaagaaacatagacttgatctgaagaaagggtcgaag
gttagatttgttgtgagccttgtgcagaagtgtatcatgaagatggagaaggttctgatc
tttgcccataacattgcacccataagcctatttgttgaaatatttgagatgatctttggc
tggcagatgggagaggaaatactggtccttcaaggtgatcaagaattatatgaacgtgca
agggttatggataaatttgaagaatcagatgggccttcaagagtacttcttgcttcaatc
acagcatgtgccgaaggcattagtttgactgctgcttcacgggttgtcttgttggattca
gaatggaacccatccaagacgaagcaagcaattgcacgggcattcaggcctggtcaggag
aggatagtctatgtctaccagcttttggcgtcagggtcactggaagaagaaaagtatggt
aagaccacatggaaggaatgggtctcaagtatgatttttagtgaggctattgtggatgat
tcttctcacaagcaggttgagaacatcgatgacgacgttctgagggagatagtggaggat
gatcaagccgaattgttccacacgataatgaagcacgataagctttcaaatggtttggat
agagggaaagcagctgaaatttttctaggcaagtaa
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