Macadamia integrifolia (macadamia nut): 122076531
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Entry
122076531 CDS
T07436
Name
(RefSeq) nuclear cap-binding protein subunit 1 isoform X1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming03013
Nucleocytoplasmic transport
ming03015
mRNA surveillance pathway
ming03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122076531
09122 Translation
03013 Nucleocytoplasmic transport
122076531
03015 mRNA surveillance pathway
122076531
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ming03019
]
122076531
03041 Spliceosome [BR:
ming03041
]
122076531
Messenger RNA biogenesis [BR:
ming03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
122076531
Spliceosome [BR:
ming03041
]
Common components
Common spliceosomal components
Cap binding complex
122076531
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like
MIF4G
MIF4G_like_2
YscO
DUF5798
Motif
Other DBs
NCBI-GeneID:
122076531
NCBI-ProteinID:
XP_042497800
LinkDB
All DBs
Position
4:complement(21622082..21676062)
Genome browser
AA seq
865 aa
AA seq
DB search
MSSWRTLLLRIGDNCPEYGGTSDFKDHIETCYGILMRELDHSKDDILAFLLQCAEQLPHK
IPLYGTVVGLLNLESEDFSRKVVEHTQTNLQDALHSGDCNRIRILMRFLTMLMCSKVLQP
GSIIVVFETLLSSAATTVDEENGNPSWQARADFYITCILSCLPWGGAELIEQVPEEIERV
MVGIEAYLSIRKHTCDTGFSAFEFDDESEKAYGEKDFLEDLWERIQALSSNGWNLDSVPR
PHLLFEAQLVAGKSYDLGPISCPEQPAPPPVLSGVTCGRQKHEAEMNYPRRLRRLNIFPA
SKFEGQQPIDRFIVEEYLLDVLFFFNGCRKECASFMVGLPVPFRYEYLMAETIFSQLLLL
PQPPFKPIYYTLVIIDLCKALPGAFPSVVAGAVRALFERIADLDMECRTRLILWFSHHLS
NFQFFWPWEEWAYVLELPKWAPQRVFVQEVLEREVRLSYWEKIRQSIENAPALEELLPPK
GGPNFKYSAEDGSERAEAHALSVQLSIMVKGRVTSQEIISWVEESIISVHGFTVALEVVI
QTFLDIGSKSFTHLITVLERYGQVIAKLCPDLDKQVILIDEVSSYWKNNAQTKAITIDRM
MGYRIISNLAIVNWVFSPPNVEQFHASDHPWEILRNAVEKTYNRVSDLRKEISSLEKAVL
SAEEATAKAKADLEAAESKLTVVNGEPVLGENPARMKRLKSYTEKAKEHEVSICDSLEAK
TALLTRALDENEALFVSLYKSFSNVLMERLHHASLDEKKGLVPSDQMETMAVDSEEPSAM
EMDKENGRQEKSDANGEIERNSYKMGENQQWCISTLGYVKAFSRQYATEIWPHIEKLDSE
VFTENAHPLFRKAVFSGLYRPIHEE
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgagtagctggcgtactcttcttctgagaatcggcgataattgccctgagtatggcgga
acttccgatttcaaagatcacattgaaacatgctatggtatacttatgcgcgagctggac
cactctaaagatgacattttagcattccttctccagtgtgctgaacaactgcctcacaag
attcctttgtatggtacagtggttggattgttgaatctggaaagtgaggatttttccaga
aaagtagtggagcatactcaaactaacttgcaggatgctttacactcaggcgattgcaat
agaattcgtatcttgatgcggtttctgacaatgctgatgtgcagcaaagtgctccaacca
gggtcgataattgtggtcttcgaaacactattgtcatctgctgccacaacagtagatgaa
gaaaatggaaatccttcttggcaagcacgtgcagacttttacataacttgcatcttgtct
tgtctcccatggggaggtgcagagctgattgagcaagtccctgaagaaattgagagagtt
atggttggaatagaggcatacttaagcatcagaaaacatacctgtgatactgggttctca
gcttttgagtttgatgatgaaagtgagaaggcttatggtgaaaaggatttcttagaagat
ctatgggagaggatacaagctttatctagcaacgggtggaatcttgatagtgttcccagg
cctcaccttttgtttgaagctcagctagttgctgggaagtcatatgatcttggtcctatt
agctgccctgagcaaccggctcctcctcctgtactttctggggtcacttgtggtagacaa
aagcatgaagccgaaatgaactatcctcgaaggctgcgaaggcttaatatatttcctgca
agtaaatttgagggtcagcaacctatagatcgcttcattgtggaggagtatttgctggat
gtgctcttcttctttaatggctgtcgcaaagaatgtgcatcattcatggttggtctcccg
gtgcccttccgatacgagtaccttatggcagagacaatattctctcagctgcttttactg
cctcaaccaccattcaagccaatttactatacactggttattattgacctctgcaaggct
cttcctggggcttttccatctgttgtggctggagcagttcgtgctctttttgagagaatt
gctgatttggatatggaatgtagaacacggctgatcctctggttctcacaccacctatca
aactttcagttcttttggccatgggaagagtgggcttatgtattggagctcccaaaatgg
gcaccacaacgagtgtttgttcaagaagtattggagagggaagtccgtctatcatattgg
gagaaaattaggcagagcattgaaaatgctcctgcgttggaggagttgcttccccctaag
ggtggcccaaacttcaagtacagtgcagaagatggtagtgagagagcagaagcacatgca
ctctctgttcaactcagcatcatggtgaaagggagggtgacatcccaggagattatttct
tgggttgaagaaagtattatctcagttcatggctttacagttgcacttgaagtggttatt
caaacctttcttgacattggatcgaaaagtttcactcatttgatcaccgtattggagaga
tatggccaagtaattgctaaactgtgtcctgatctggataagcaagtgatactgatagat
gaagtcagttcgtactggaagaacaatgctcaaacgaaggcaattaccattgaccgaatg
atgggttaccggattatatctaatttggccatagtcaactgggttttctcccctcctaat
gttgagcagttccatgcatcagatcatccatgggagattctaaggaatgcagtcgaaaag
acatacaatcgcgtatcagatctaaggaaagaaatttcatcccttgagaaggctgtttta
tcagctgaggaggccacggcaaaggctaaagcagacctagaggctgccgagtcaaaactt
acagttgttaatggtgaacctgtactgggtgaaaaccctgcaagaatgaagcgcctcaaa
tcatatactgagaaagcgaaagagcatgaagtttccatatgtgattctttagaggcaaag
accgccctccttactcgagcccttgatgaaaatgaggccttgtttgtttctttatataag
agcttctcaaatgtgcttatggaacgcctgcatcatgcatctttagatgaaaagaagggt
cttgtaccgtctgatcagatggagacaatggctgtggactctgaagaaccatcagcaatg
gagatggacaaagagaatggaagacaagagaaaagtgacgccaatggtgagatagaaagg
aacagctataaaatgggagaaaatcagcaatggtgtatatcaactttgggttacgtcaag
gccttttcaaggcaatatgcgactgagatttggcctcacattgagaagctggattctgag
gtatttacagagaatgcccatccacttttccgcaaagctgtcttttctggtttgtaccga
ccaatccatgaagagtga
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