Macadamia integrifolia (macadamia nut): 122076615
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Entry
122076615 CDS
T07436
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH15 chloroplastic isoform X1
KO
K26077
ATP-dependent RNA helicase ISE2 [EC:
5.6.2.6
]
Organism
ming
Macadamia integrifolia (macadamia nut)
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ming03041
]
122076615
Enzymes [BR:
ming01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
122076615
Spliceosome [BR:
ming03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
122076615
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH3_ISE2
DSHCT
DEAD
ResIII
DEXQc_Suv3
Helicase_C
AAA_22
IstB_IS21
Ski2_cyano_M
Motif
Other DBs
NCBI-GeneID:
122076615
NCBI-ProteinID:
XP_042497950
LinkDB
All DBs
Position
4:11616029..11635643
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AA seq
1167 aa
AA seq
DB search
MRTLSTSSSLLELSHLIPFFSYSGNAIFRNLVFSIPRKFVTLRTTSSLSLPSHSYPRAIS
HSANQLSDVEEEEDEDEDEDGDEDDDDDEAADEYEEFSVDLFDDNKYEDDEIDSTVMEAP
PRFEGQKWQRIDKLRSQVRELGDELIDLDELASFYDFRIDKFQRLAIESFLRGSSVVVSA
PTSSGKTLIAEAAAVATVVRGRRLFYTTPLKALSNQKYREFRETFGESNVGLLTGDSAVN
KDAQILIMTTEILRNMLYQSIGMISSGSGLFHVDVIVLDEVHYLSDISRGTVWEEIVIYC
PKEVQLICLSATVANADELAGWIGQIHGTTELVTSKKRPVPLTWHFSMKSSLLPLLNEKG
TSMNRNLQLSALEGESYREVGSRRRNSRRHEKGSYKSGSMSGQSTSSKDDTNTIRRSQVP
QVKDTLWYLRQKHMLPAIWFIFSRKGCDASVQYLEHFKLLDDCETSEVELALKRFRVQYP
DAVRESAIKGLLNGVAAHHAGCLPLWKSFIEELFQQGLIKIVFATETLAAGINMPARTAV
ISSLSKRSDSGRIHLRPNELLQMAGRAGRRGIDERGHVVLVQTPYEGAEECCKILFSGVE
PLVSQFTASYGMVLNLLAGAKVTRRSKEAEMKVLKAGRTLEEARKLVEQSFGNYVGSNVM
LAAKEEIAEIQKEIEVLTLEVGDDAVDRKSRKQLSEKTYREISDLQEELREEKRLRTELR
RRMEIKRITSLKPLLKEMENGDLPFICLQHNKGGVQHLLPAVYLGKADALSGSKYKNMIY
ADGSFAIDIMEKEFDFGDMEAQFDAKPSYYVALGSDNSWYLFTEKWIKVVYGTGFPNVPL
VQGGALPREIMRAHLDKEELQWKKLSDSEFGDLWCTEGSLETWSWSLNVPGLSSLSDENG
VLQMSQAYQDAIVCYKDQRNKVSRLKKKIARTEGFKEYKKIIDMTNFTKEKIERLKARSV
RLVSRIEQIEPSGWKEFLQISNVIHEARALDINTKVIFPLGETASAIRGDNELWLAMVLR
NKILLDLKPAQLAAVCGSLVSAGIRVRPWKNNSYIYEPSTSVVNIVNILDEQRLSFLKLQ
EKHGVKIPCELDTQFSGMVEAWASGLTWREIMMDCAMDEGDLARLLRRTIDLLAQIPKLP
DIGPILQNNAMIASNIMDRPPISELAG
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgcggaccctctccacttcgtcctctcttttggaattatctcatcttatcccttttttc
tcctacagtggcaatgccatttttcgaaatttagtttttagtattcccaggaagtttgtc
acattaaggacaacttcatctctttctctgccatcccatagttatcctcgggccatttcc
cattcagcaaatcaactctccgatgtcgaagaagaagaagatgaagacgaagacgaagac
ggagatgaagacgacgacgatgatgaagctgcggatgagtatgaggagttctctgttgat
ttgtttgacgacaataaatatgaggatgatgagattgattcaacagtaatggaagcacct
cctcggttcgagggacaaaaatggcagagaatcgacaaacttcgatcccaagtaagagag
cttggggatgaacttatcgatctggatgagcttgcttccttttacgatttccgcatcgat
aaatttcagaggttggctatagaatctttcttgagaggttcatctgtggtggtttctgca
ccaacgagtagtggaaagactctgatagcagaagcagcagctgtagccacggtagtgaga
ggaaggagactcttctatacaactcctttgaaggcattatctaatcaaaagtatagagaa
tttcgagagacatttggtgaaagcaatgttggccttctcacgggagactctgcagtcaac
aaagatgctcaaattttaatcatgactactgagattctgcgcaatatgttatatcagagt
attggaatgatttcttccgggagtggattgttccatgtcgatgtgattgttttggatgaa
gtacactatctcagtgacatttctcggggtacagtttgggaagagatagtgatttattgt
ccaaaagaagtccaacttatatgtctttcagcgacagttgcaaatgctgatgagctggct
ggttggattgggcagattcatggtacaactgagctggtaacatcaaagaaacgacctgtt
ccattgacttggcatttctctatgaaaagttctttgttaccactacttaatgagaaagga
acgagcatgaacaggaacctacagctttctgctttggaaggtgaatcttatagggaagtt
ggatctagaagaaggaattctagaagacatgaaaaagggagctacaaaagtgggagcatg
tctgggcagtcaacatcgtcaaaagatgacacaaatacaatccgccgttcacaagttcct
caggttaaagacacattgtggtaccttaggcaaaagcatatgctgcctgctatttggttt
atttttagcaggaaaggatgtgatgcatctgttcagtatcttgaacatttcaagcttttg
gatgactgtgagacaagtgaagttgaactagccttgaaaaggttccgtgtacagtaccct
gatgctgttcgagaatctgccataaaaggccttctgaatggggttgcagcacaccacgca
ggctgtctacctttgtggaagtcatttattgaagagttgtttcagcaaggactcattaaa
attgtctttgctacagaaactcttgctgctggcatcaacatgcctgccaggacagctgtt
atttcatctctcagtaaaaggagcgatagtggacgtatccatttgagaccaaatgagttg
cttcaaatggctggtcgagctggacgtagaggtattgatgaaaggggtcacgtagttctt
gttcagactccttatgaaggagcagaagaatgctgcaagattcttttttctggagtagag
cctcttgtctctcagttcactgcttcatatggcatggtgctaaatctccttgcaggcgca
aaagttactcgcagatcaaaggaggcagaaatgaaagtcttaaaagcgggacgaacacta
gaagaagctcggaagctggttgaacaaagtttcggaaactatgttgggagtaatgttatg
cttgctgccaaagaggagattgctgaaatacagaaagaaattgaggtgttgactttggaa
gttggtgatgatgctgttgataggaagagtcggaagcagttatctgaaaaaacatacagg
gagatttctgatctgcaggaggaattacgggaagagaaacgattgcggactgaactgaga
cgaaggatggaaataaagaggattacttctttgaaacctctattaaaggagatggaaaat
ggtgatttaccctttatctgcttgcagcataataaaggaggagttcaacacttacttcct
gctgtttatttggggaaggctgatgctctttctggttcaaaatacaagaacatgatttat
gcagatggttcttttgctattgatatcatggaaaaagagttcgattttggagatatggaa
gcacagtttgatgccaaaccatcttattatgtggctcttggttcggataactcttggtat
ttgttcacagagaagtggatcaaagtggtttatggaactggctttcctaatgttccttta
gttcaaggtggtgctttgcccagggaaataatgagagcacaccttgataaggaagaattg
cagtggaagaagctttctgattctgaatttggagatctgtggtgcacggaaggatctctt
gagacctggtcttggagtttaaatgtgccaggcttgagtagcctctctgatgaaaacggg
gtgctgcaaatgtcccaagcataccaggatgctatagtgtgttacaaggatcaaagaaat
aaagtttcccgtttgaagaaaaaaattgctcgtacagaaggcttcaaagagtataagaaa
atcatagatatgactaacttcactaaggaaaagattgaacgcttgaaggctaggtctgtt
cggcttgttagtcgaatagagcaaattgaaccgtctggctggaaggagttcctccagatc
agtaatgtcattcatgaagccagagcgttggatattaatacaaaagtgatatttcctctt
ggtgagacagcgtcggcaatacgaggagacaatgaactctggcttgcaatggtgctccga
aataaaattttactagatttaaagcctgcacagcttgctgccgtatgtggaagtttggtt
tcggcaggaatcagagttcgtccttggaagaacaacagctatatatatgaaccttcaact
tctgtagtcaatattgttaacattttggatgagcagagactctctttcttaaaactacaa
gaaaaacatggcgttaagataccttgtgagttggatactcaattctctggcatggttgaa
gcttgggcctctggtctaacttggcgggaaataatgatggattgtgcaatggatgaaggg
gatttagctcgcctcttacgacgtacaatcgatttattggctcagattccaaaattgcct
gatattggtcccatcctacaaaacaatgccatgattgcatccaacatcatggaccgaccg
ccaataagtgagctggctggatga
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