Macadamia integrifolia (macadamia nut): 122076625
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Entry
122076625 CDS
T07436
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20-like isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122076625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ming03041
]
122076625
03009 Ribosome biogenesis [BR:
ming03009
]
122076625
Enzymes [BR:
ming01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122076625
Spliceosome [BR:
ming03041
]
Complex A
U1 snRNP components
U1 related factors
122076625
Complex B
122076625
Ribosome biogenesis [BR:
ming03009
]
Eukaryotic type
Pre-60S particles
Helicases
122076625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
122076625
NCBI-ProteinID:
XP_042497962
LinkDB
All DBs
Position
4:7073656..7086659
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AA seq
608 aa
AA seq
DB search
MAAMTNPCDSRYSDPNSYRERRSGLMSPQRSIAPTMGGVGGGSPSAFASGRGGGGVGAAA
SRPGGFDRFPTFQPGVGRAFSVGQGGGERGGRVSYPDRGGSGIRGGRDRGRGRGDIRGRG
GGRGFDAGRGGGRASFGCGGGRGRDGGNSRGDLNSIALPNQDFGGLVPFEKNFYVESPEV
QAMTEQEVGLYRARREITVEGYDVPKPIRLFNEANFPAYCLEVIAKLGFVEPTPIQSQGW
PMALKGRDLMGVAETGSGKTLAYLLPALIHVSAQPRLVRGEGPIVLVLAPTRELAVQIRE
EAAKFASHSHIRRTCIYGGAPKGPQIRDLQAGVEIVIATPGRLIDMLEAQNTNLRRVTYL
VLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPRQVEALARQFLCNPYKVIIGSP
NLKANQSINQVVEVMTEMEKYNRLIKLLTEMMDGSRIIVFLQTKKGCDKVTRQLRMDGWP
ALSIHGDKNQAERDRVLSAFKSGRSPIMTATDVAARGLDVKDIKCVVNYDFPSSLEDYVH
RIGRTGRAGAKGTAFTFFTHANAKFVKNLVKILQEAGQVVNPALAALARSGSGGGFRSSG
RGGGFGKW
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgatgacgaacccttgcgattccagatattctgatcctaactcttatagggag
aggagaagtggcctaatgtcgccacagcgatcgatagcacccacgatggggggagtaggt
ggtggatctccttcagctttcgccagcggaagagggggtggaggggttggggccgctgcc
agcaggccgggtgggtttgacaggtttccgaccttccaacctggcgtcggcagagcgttt
tctgttggccaaggtggtggagaacgtggaggtagggtttcctatccagaccgtggtggc
agtggtattagaggaggcagggatagaggacgtggacgtggcgatataaggggtcgcggt
ggtggcagaggtttcgatgcgggacgtggtggaggtagagcgagcttcggttgtggtgga
ggtagaggtagagacggtgggaattccagaggggatttgaacagcattgctcttccgaac
caggattttggaggcttggtaccgtttgagaaaaatttttacgtagagagccctgaagtt
caggcaatgacggagcaagaggttgggctgtaccgtgcaaggcgtgagatcaccgttgaa
ggctacgatgtccccaagccgatcagactatttaatgaggcgaattttccggcgtactgc
ctcgaggtgatagccaaactggggtttgttgaacctacgcccattcaatctcaaggatgg
ccgatggctttaaaaggtagagatttgatgggtgttgcggagacgggttctggtaagacg
ttggcatatctgttgcctgcgttaatacatgtcagtgcacagccccgattggtacgaggt
gaaggacccatcgtattggttttagctcctacaagagaattggctgttcagatacgagaa
gaagctgccaaattcgcttcacattcacatatcagaaggacttgcatatatggtggtgcc
cctaaggggccacagattcgtgatctccaagcaggggttgagattgtcattgcaacacct
ggtcgattgattgatatgttggaagctcaaaataccaacttacggagagtaacatacctg
gttttggatgaggctgaccgaatgttagacatgggttttgaaccacagatccggaaaatt
gtatcccaaattcggccagatagacagaccttatattggagtgctacatggcccaggcag
gtggaggccttggctaggcagttcttatgtaatccctacaaggtcatcattggatctccg
aatttgaaggcaaatcaatctataaaccaggttgttgaggttatgacagagatggaaaag
tataataggctgatcaaactgcttacagaaatgatggatggaagccgaatcattgtattt
ctgcagacaaaaaaaggatgtgataaggtcacacggcaactgaggatggatggatggcca
gctctatccatccatggtgataaaaaccaggctgaaagggatcgggttctatctgcgttc
aaaagtggtagaagtcctataatgactgccactgatgtagctgcacgtggtcttgatgtg
aaagacataaaatgtgtggtaaattacgattttccatcgagccttgaagattatgttcac
aggattggacgaactggtcgcgcaggtgctaagggaactgcatttaccttttttacgcat
gcaaatgcaaagtttgtgaagaatcttgttaaaatcctacaagaagctggccaggtcgtg
aatcctgcattggctgccttagcccgctcagggtcgggagggggcttccgctccagcggg
cgaggaggtggttttggtaaatggtaa
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