Macadamia integrifolia (macadamia nut): 122076718
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Entry
122076718 CDS
T07436
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122076718
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ming03019
]
122076718
03009 Ribosome biogenesis [BR:
ming03009
]
122076718
04131 Membrane trafficking [BR:
ming04131
]
122076718
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ming04147
]
122076718
Messenger RNA biogenesis [BR:
ming03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
122076718
Ribosome biogenesis [BR:
ming03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
122076718
Membrane trafficking [BR:
ming04131
]
SNARE
SNARE associated proteins
Others
122076718
Autophagy
Aggrephagy
Other aggrephagy associated proteins
122076718
Exosome [BR:
ming04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122076718
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_33
AAA_2
AAA_5
AAA_22
AAA_14
NPHP3_N
TIP49
RNA_helicase
AAA_17
nSTAND3
Mg_chelatase
AAA_28
nSTAND_NTPase5
ATPase_2
Parvo_NS1
AAA_18
Vps4_C
Viral_helicase1
ABC_tran
NB-ARC
AAA_7
NACHT
AAA_lid_PRS2_C
TsaE
IstB_IS21
DUF815
ResIII
Zeta_toxin
AAA_24
Zot
Motif
Other DBs
NCBI-GeneID:
122076718
NCBI-ProteinID:
XP_042498126
LinkDB
All DBs
Position
4:7424460..7431056
Genome browser
AA seq
817 aa
AA seq
DB search
MADSSSSAADRGQPSSSSDPKSKKDFSTAILERKKSPNRLVVDEAINDDNSVVSMNAATM
EKLQFFRGDTVLIKGKKRKDTVCIVLGDDQCEEPKIRMNKVVRANLRVRLGDVVSVHQCP
DVKYGKRVHILPIDDTIEGVTGNLFDVYLKPYFLESYRPLRKGDLFLVRGGMRSVEFKVI
ETDPGEYCVVAPDTEIFCEGEPIKREDEERLNEVGYDDVGGVRKQMAQIRELVELPLRHP
QLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLR
KAFEEAEKNAPSIIFIDELDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVMGAT
NRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVDLEKVSKNTHGYV
GADLAALCTEAALQCIREKMDVIDLEDETIDAEVLNSMSVTNEHFQTALGTSNPSALRET
VVEVPNVSWEDIGGLDNVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL
AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRG
SSVGDAGGAADRVLNQLLTEMDGMTAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPL
PDEASRLQIFKSCLRKSPVSQDVDLSALARYTHGFSGADITEICQRACKYAIRENIEKDI
ERERKRRDNPEAMEEDDVDDVPEIKAAHFEESMKFARRSVSDADIRKYQLFAQTLQQSRG
FGSEFRFADRSENAAGTGASDPFSSAAAGGEDDDLYG
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atggcggattcgagttcatccgctgcggatcgtggccagccttcttcgtcgtcggacccg
aaaagtaagaaggacttttctactgcaatattggaacgcaaaaagtctccaaaccgtctt
gttgttgatgaagctataaatgatgacaattctgtggtttccatgaatgctgccactatg
gaaaagctccagtttttccgaggagacacagttttaatcaaggggaagaagcgaaaggac
acagtttgcatagttcttggtgatgatcaatgcgaagaaccaaaaatcagaatgaataaa
gttgtacgtgctaatcttagggtacgtcttggggatgttgtatctgtccatcaatgtcca
gatgtgaagtatgggaaacgtgttcacatccttcctattgatgatacaatcgagggtgtg
acgggaaacctgtttgatgtgtatttgaagccatatttcctggaatcatatcgacctttg
aggaaaggggatctttttcttgttagagggggcatgcgaagtgttgaattcaaagttatt
gagacagatcctggtgaatattgtgttgttgcaccagacacggagatcttttgcgaggga
gaacctatcaaacgtgaggatgaggagcgactaaatgaagttggctatgatgatgttggt
ggtgtcaggaagcaaatggctcagatacgtgagctggtagagcttcctttgagacacccg
caacttttcaagtccattggtgtaaagcctccaaaaggcatcttgctttatggtccacca
ggttctgggaaaacccttattgcaagggctgttgccaatgagactggtgcattcttcttc
ttgataaatggacctgagataatgtcaaagttggctggtgaaagtgagagtaatttaagg
aaggcttttgaagaagctgagaagaatgctccttccatcattttcattgatgagctggat
tccattgccccaaagagagaaaagacacatggtgaagtcgaaagacgtatagtctcgcaa
cttctcactttaatggatggtcttaagtcccgagcacatgtgattgtgatgggagccacc
aataggcccaacagcattgaccctgctcttaggagatttggtagattcgatcgagagata
gatattggtgtgccagatgaggttgggaggctggaagttcttcgtatacatacaaagaat
atgaaacttgcagaagatgttgatctggaaaaggtatcaaaaaatacgcacggttatgtt
ggtgcagatcttgctgctctttgcactgaggctgctcttcagtgcattagggagaagatg
gatgttattgacttagaagatgagacaattgatgcagaggttttaaattcaatgtctgta
acaaacgagcatttccaaactgctctaggaacttccaatccatcagccttgcgtgaaacg
gttgttgaggtgcccaatgtctcatgggaagatatcggtgggttggacaatgtgaaaaga
gagcttcaggagactgtccaatacccagtggagcatccggagaagtttgaaaagtttggc
atgtctccatccaaaggtgtcctcttctatggtccacctgggtgtggtaaaaccttactt
gccaaggcaattgcaaatgagtgtcaagcaaattttattagtgtcaaaggacctgaattg
ctgacaatgtggtttggagaaagtgaggcaaatgtgcgagagatatttgataaggcacgc
cagtcagctccatgtgtactattctttgatgaacttgattctattgccactcagcgtggg
agttcagtaggagatgctgggggtgctgcagacagggttttgaaccaactcttgacagag
atggatgggatgactgctaagaagacggtttttatcattggggcaacgaacaggccagat
attattgatcctgcattgctcaggcctggtcgtctggaccagttgatatatataccactg
ccagatgaagcctctcgtctccaaatcttcaaatcgtgcttgcgcaaatcacccgtctct
caggatgttgacctttcagctcttgcacggtacactcatggtttcagcggtgcagatatc
acggagatctgtcagcgtgcttgcaaatatgctatcagagaaaacattgagaaggatatt
gagagggaaaggaagaggagagataacccagaagcaatggaagaggatgatgtggatgat
gtgcctgagataaaggctgcacattttgaagagtccatgaaatttgctcgcaggagtgtt
agtgatgctgatatcaggaagtaccagctattcgctcagacacttcagcaatctcgaggc
tttggttcagagtttcggtttgcagatcgctctgagaatgccgcaggaaccggggcctca
gatccattctcttctgctgcagccggtggagaagatgatgacttatatggttaa
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