Macadamia integrifolia (macadamia nut): 122076780
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Entry
122076780 CDS
T07436
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit B
KO
K07466
replication factor A1
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming03030
DNA replication
ming03420
Nucleotide excision repair
ming03430
Mismatch repair
ming03440
Homologous recombination
ming03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
122076780
03420 Nucleotide excision repair
122076780
03430 Mismatch repair
122076780
03440 Homologous recombination
122076780
03460 Fanconi anemia pathway
122076780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ming03000
]
122076780
03032 DNA replication proteins [BR:
ming03032
]
122076780
03400 DNA repair and recombination proteins [BR:
ming03400
]
122076780
Transcription factors [BR:
ming03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
122076780
DNA replication proteins [BR:
ming03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
122076780
DNA repair and recombination proteins [BR:
ming03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
122076780
MMR (mismatch excision repair)
122076780
DSBR (double strand breaks repair)
HR (homologous recombination)
122076780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
DUF223
tRNA_anti-codon
Motif
Other DBs
NCBI-GeneID:
122076780
NCBI-ProteinID:
XP_042498250
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All DBs
Position
4:18414660..18419244
Genome browser
AA seq
603 aa
AA seq
DB search
MEKNSITPDAISTILVNPSPGSSSEVPELIVQVVDLKPVGNRFTFMASDGKMKVKAILPS
NMSAEIESGNIQNLGLIRILDYTLNVIPNKSEKYLIATKCEVVSPALEMEVKSEVKKEDF
GIVLKPKQEMVTKSAVQILHEQHGNMAPAARMAMTRRVHPLVSLNPYQGNWTIKVRVTSK
GNMRSYKNARGEGVVFNVELADEDGTQIQATMFNDAAKKFYDRFELGKVYYISRGTLRVA
NKQFKTVQNDYEMTLNENSEVEEATGEATFVPQTKFSFVPIDQLGLYVNGRELVDIIGVV
QNVSPTLSVRRKINNETIPKRDITIADESKKTVVVSLWNDLATNIGQELLDMVETAPIVA
IKSLKVGDFQGVSLSSLTKSSVLLNPDIPESKKLKSWYDSEGKGSLMASVGSGLVPTSAR
TGRSMYSDRVFISHITGNPSLGEDSKPEFFNLKACISLIKPDQTMWYRACKTCNKKVTEA
VGSGYWCEGCQKNDNDCSLRYIMVVKVSDPSGEAWLSVFNEHAERIVGCTADELDKMRSE
DMDAYNLKLKEATWVPHLFRVSVAQNEYMNEKRQRITVRVQSLLDFAAESRYLLEEISKM
QVS
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaaacagcatcactcctgatgctatttctactattctagtgaacccatctcct
ggatcgtcatctgaagtcccagaactcattgttcaggttgtcgatctcaagcctgtcggc
aacagatttacatttatggctagtgatggaaagatgaaagttaaggccattcttccgtcc
aatatgtcagctgagatcgaatcaggaaatattcagaatctagggctcatccgcattctt
gactatacactcaatgttattccgaataagtctgagaagtatctgattgcaacaaaatgt
gaggtggtttctcctgcacttgaaatggaagtcaagagtgaagtgaaaaaggaagatttt
ggcattgttttgaagccaaagcaagagatggttactaaatctgctgtccagattttgcat
gaacaacatgggaatatggctcctgctgcacggatggctatgacccgaagagttcatcct
cttgtttccttgaatccttaccaaggtaactggaccataaaggttcgagtcacaagtaaa
ggtaacatgcggtcttacaaaaatgctagaggagaaggagttgtcttcaatgttgaatta
gcggatgaagatggaactcaaatacaagcaacaatgtttaatgatgctgcaaagaagttc
tatgacaggtttgaattgggaaaggtttattacatatctagaggaaccctcagagttgcc
aacaagcagtttaagactgtccaaaatgattatgaaatgactttaaatgaaaactctgag
gtggaagaggcaactggagaagctacttttgttcctcaaacaaaattcagttttgtccca
attgatcaattggggctgtatgttaatgggagggaacttgtagatatcattggagtggtt
cagaatgtttctcctactttgagtgtccgaagaaagattaacaatgagactatcccaaaa
cgagatattacaattgctgatgaatcgaaaaagactgttgtggtatctttgtggaatgat
cttgcaaccaatatagggcaggaattgctagatatggtggaaacagctcctattgtagca
ataaaatcccttaaagttggagattttcaaggagtatctttgtcttctttgaccaaaagc
tctgtattgctaaatccagacatccctgaatcaaagaaactcaaatcttggtatgactct
gagggtaaaggcagtctaatggcttctgttggctctggtttggtccctacttcagcaaga
actggaagatctatgtactccgatagagtgttcatttctcatattactggtaatccatct
ttgggtgaagacagcaagcctgagtttttcaacttaaaagcatgcattagtttgataaag
cctgatcagacaatgtggtaccgggcttgtaagacatgcaacaaaaaggtgactgaagct
gttggatctggttattggtgtgaaggatgccagaagaatgataatgactgtagtttgagg
tatataatggtagtcaaggtttctgatccaagtggtgaagcttggctttctgttttcaat
gaacatgcagaaagaatagtagggtgcactgccgatgagcttgataagatgagatcagag
gacatggatgcatacaatttaaagctgaaagaagccacttgggtcccacatttgttccgg
gttagtgttgcacagaatgagtacatgaatgagaaaaggcagagaataacagtcagagtt
cagagtttgcttgattttgctgctgaatcaagatacctgttggaagagatatccaagatg
caagtctcttga
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