Macadamia integrifolia (macadamia nut): 122076929
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Entry
122076929 CDS
T07436
Name
(RefSeq) ruBisCO large subunit-binding protein subunit beta, chloroplastic isoform X1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122076929
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ming03019
]
122076929
03110 Chaperones and folding catalysts [BR:
ming03110
]
122076929
03029 Mitochondrial biogenesis [BR:
ming03029
]
122076929
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ming04147
]
122076929
Enzymes [BR:
ming01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
122076929
Messenger RNA biogenesis [BR:
ming03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
122076929
Chaperones and folding catalysts [BR:
ming03110
]
Heat shock proteins
HSP60 / Chaperonin
122076929
Mitochondrial biogenesis [BR:
ming03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
122076929
Exosome [BR:
ming04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122076929
Exosomal proteins of other body fluids (saliva and urine)
122076929
Exosomal proteins of breast cancer cells
122076929
Exosomal proteins of colorectal cancer cells
122076929
Exosomal proteins of bladder cancer cells
122076929
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Antitox_halo
KH_PARP14_2
Motif
Other DBs
NCBI-GeneID:
122076929
NCBI-ProteinID:
XP_042498521
LinkDB
All DBs
Position
4:complement(30864647..30871498)
Genome browser
AA seq
608 aa
AA seq
DB search
MASTFIAMSSMSSLVAPCSHTKDMKLSNPFEKLSSFASISSSSLGRRQNVVLQRRCSPKI
RAMAKELYFNKDGSAIKKLQTGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVA
KEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVQIT
RGIEKTSKALVSELKEMSKEVEDSELADVAAVSAGNNYEIGNMIAEAMSKVGRKGVVTLE
EGKSAENSLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLE
DAIRGGYPIVIVAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGA
TVIRDEVGLSLDKADKEVLGHAAKVVLTKDYTTIVGDGSSQEAVNKRVAQIRNLIEAAEQ
DYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCT
LLRLAAKVDAIKDTLENDEQKVGADIVKRALGYPLKLIAKNAGVNGSVVIEKVLSSDNPK
FGYNAATGNYEDLMAAGIIDPTKVVRCCLEHAASVARTFLTSDVVVVDIKEPEPMAAGNP
MDNSGFGY
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaacattcattgccatgtcttccatgagctccctggtggcaccttgcagtcac
acaaaagatatgaagctttctaatcctttcgagaaactatcctcttttgcttccatatct
tctagttcccttggaaggagacaaaatgttgtacttcagagaagatgttcacccaagatt
agggcaatggccaaggagctgtacttcaacaaggatggatcagccattaagaagctgcag
actggtgttaacaagcttgcagacctagtcggggttactcttggtccaaagggcaggaat
gtcgtactggagagcaagtacggttcccctaaaattgttaatgatggtgtgactgtagcc
aaggaggttgagttggaggaccctgtagagaacattggtgccaaattggtgagacaagct
gcggcaaagaccaatgacttggctggtgatggaacgacaacatctgttgttcttgcacaa
ggtttgattgcagaaggtgttaaggtggttgcggctggtgctaaccctgttcaaattact
cgaggaattgagaagacctctaaagctttggtttctgagctcaaggaaatgtcaaaagag
gttgaggacagtgaattagctgatgtagctgctgttagtgctggaaacaactatgaaata
ggaaatatgattgctgaagccatgagtaaggtgggtagaaagggtgtggtgactcttgaa
gaaggaaagagtgctgagaacagcctttatgttgtagagggcatgcaatttgaccgtggc
tatatttccccttactttgtgacagacagtgagaagatggcagttgaatatgaaaactgc
aagttgcttcttgttgacaaaaagatcacaaatgcaagagatctcatcaatgttttggaa
gatgccataagaggggggtatccaattgtaatagttgctgaagacattgaacaggaagct
ctagccactcttgttgtgaataagctcaggggggcactgaagattgctgcgctaaaagct
cctggatttggagagcgcaagagccaatacctcgacgacattgctattcttactggagca
actgtaattagagatgaagttgggctatcccttgacaaggctgataaggaggttttgggt
catgctgccaaggtggtacttaccaaggactataccacaattgtaggtgatggcagctct
caagaagcagtaaataagcgagttgctcaaattcggaacctcattgaggctgcagaacaa
gattatgagagagagaagctcaatgagagaattgctaagctctcaggtggtgttgctgtc
attcaggttggagcacaaacagagacagaactgaaggagaagaagttgagggttgaagat
gctcttaatgcaacaaaggcagcagttgaagaaggtatagtagttggtggtgggtgtacc
ttgttaaggcttgctgcaaaggttgatgccatcaaagatacacttgaaaatgatgagcaa
aaggttggggctgatatcgttaaaagggcattgggctaccctcttaagttaattgccaaa
aatgcaggtgtcaatggaagtgtggttattgagaaggtgctttctagtgacaatcctaag
tttggttacaatgctgcaactgggaactatgaggatttgatggcggctgggataattgat
ccaaccaaggttgttagatgttgcctggagcatgcagcctcagttgcaaggaccttcctc
acatcagatgttgtggttgtggacattaaggagcctgaacctatggctgctggaaacccg
atggacaattcagggtttggttactga
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