Macadamia integrifolia (macadamia nut): 122077060
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Entry
122077060 CDS
T07436
Name
(RefSeq) THO complex subunit 4D-like isoform X1
KO
K12881
THO complex subunit 4
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming03013
Nucleocytoplasmic transport
ming03015
mRNA surveillance pathway
ming03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122077060
09122 Translation
03013 Nucleocytoplasmic transport
122077060
03015 mRNA surveillance pathway
122077060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ming03019
]
122077060
03041 Spliceosome [BR:
ming03041
]
122077060
Messenger RNA biogenesis [BR:
ming03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
122077060
TREX complex
122077060
Spliceosome [BR:
ming03041
]
Complex C
Other components
EJC/TREX
122077060
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
122077060
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_10
EBNA2_Core
Motif
Other DBs
NCBI-GeneID:
122077060
NCBI-ProteinID:
XP_042498759
LinkDB
All DBs
Position
4:12788345..12799814
Genome browser
AA seq
275 aa
AA seq
DB search
MATSLDMSLDDLIKSRSSSERGRGRGRGRARRGRGQGGSFGRGRTGGNRGGALRVNARPS
SYAIAKSFNRTKDFTWQHDLFQDSLMAAGISGIESGTKLYVSNLDYGVSNEDIKELFSEI
GELKRYAIHYDRNGRSSGSAEVVYVRKSDALAAVMRYNSVVLDGKPMKIEIIGTNLELPV
SARMNVIGAANGRGRRTVFMTPEVGLGRGSAPVNNSSGRWSRGVSWRGRGGGRGRGRGRG
RGWGRGRGRKQPVEKSAEELDKELDTYHTEAMQTS
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atggcaacttctttggatatgtcgcttgatgatctgataaagagcagaagtagtagcgag
agggggagaggtcgaggccgtggtcgggcccgcagagggcgaggccaaggtgggagtttt
ggccgtggaagaacgggagggaaccgtggaggggctctaagggtgaatgcacggccatca
tcttacgcaattgctaagtctttcaacagaaccaaggattttacgtggcaacatgatttg
tttcaagatagcctgatggctgcagggatatctgggattgaatctgggacaaagttatac
gtctcaaacttggactatggtgttagcaatgaagatataaaggaacttttctctgagatt
ggagagctgaagcggtatgcaatccattatgacagaaatgggcgttcaagtggttcagct
gaagtggtgtatgttagaaaaagtgatgcattagcggctgttatgcgatataacagtgtt
gtactggatgggaagccaatgaaaattgaaatcattggcaccaatttggaattgcctgtt
tcagctagaatgaatgtcattggagcagcaaatggaagaggaaggagaacagtttttatg
acgcctgaagtgggtcttggaagaggatctgctccagtcaataatagttctggcaggtgg
agtcgtggagtttcctggcgtggccgtggtggtggccgtggccgtggtcgtggtcgaggc
cgtggttggggtcgtggccgtgggaggaaacaacctgttgagaagtcagctgaggaactg
gataaagaattggatacctatcatactgaagcaatgcaaacatcctag
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