Macadamia integrifolia (macadamia nut): 122077112
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Entry
122077112 CDS
T07436
Name
(RefSeq) DNA polymerase lambda isoform X1
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming03410
Base excision repair
ming03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
122077112
03450 Non-homologous end-joining
122077112
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ming03400
]
122077112
Enzymes [BR:
ming01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
122077112
DNA repair and recombination proteins [BR:
ming03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
122077112
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
122077112
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_lambd_f
DNA_pol_B_thumb
HHH_8
NTP_transf_2
HHH_5
BRCT
PTCB-BRCT
SspP
Motif
Other DBs
NCBI-GeneID:
122077112
NCBI-ProteinID:
XP_042498847
LinkDB
All DBs
Position
4:11217656..11231122
Genome browser
AA seq
548 aa
AA seq
DB search
MAPKSRKKKELPRSPEQPGMFEGMVVFLVVNEVQPRRLQIWKQKLVQMGATIEDRLLKRV
THIFAMNSRALLKQVDRDWLTCFRGSLLLYQWLEESLRLGEKVPEDSYSLKLDSEGGEEE
KYLEAISSESVNDNNLGGGKPSPCKKVRLAPGDSNVASLVSGEDNRKVPGDEAPNTTGGS
DDSTHYTSSPENCSQYIPDASNRNISSSELSLDYSPPDLNRNITEIFGKLVNIYRALGDD
RRSFSYYKAIPVIEKLPFKIESVDQVKHLPSIGKSMQDHIHEIVTTGKLSKLEHFETDEK
VRTISLFGEVWGVGPATALKLYEKGHRSLDDLKNEDTLTNGQKIGLKYFDDIKTRVPRHE
VQEMDLLLQKAGEDVLPGVVVVCGGSYRRGKATCGDLDIVITHPDGKSHKGFLRKYVKHL
KDIGFLREDLIFGIHSEEDTDSGVDTYFGLCTYPGREQRHRIDLKVYPRDIYAFGLIAWT
GNDVLNRRLRLIADSKGYRLDDTGLFLATQGSGGKRGARSSMSLSFKTEKEVFDFLGFPW
LEPHERNL
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcgccaaaatcaagaaagaagaaggagctccctcgttctccagagcaaccgggaatg
tttgagggaatggtagtcttcttggttgtaaacgaagtacagccacgcagattacagata
tggaaacagaagctggtgcagatgggagctaccattgaggatcgccttttaaagagggtt
actcatatttttgctatgaactccagagcccttctaaagcaagtggatcgggattggttg
acgtgctttagagggagtttactcctttaccagtggttggaggaaagcttgagattagga
gaaaaagtgcctgaggattcctacagtctaaaactggattctgaagggggggaggaggaa
aaatatttagaggcaatctcatctgaatcagtgaatgacaacaatttgggtggtggtaaa
ccttccccttgcaaaaaggtcagattggctcctggggattcaaatgttgcaagtctagtg
agtggggaagataatagaaaagttcctggagatgaggcaccaaatactactggaggttcc
gatgactccactcattatacatcaagtccagaaaattgtagtcaatatattcctgatgct
tcaaataggaatattagttcttcagagttatccctggactatagtccgcctgatttaaat
aggaatataactgagatatttggaaaacttgtcaacatatacagagccctaggtgatgac
aggaggtcgtttagttattacaaagccattccagtgattgagaagttgcctttcaagatt
gaaagtgttgaccaggtcaaacacctgccctcgattgggaagtcaatgcaggaccatatt
catgagatagtgactactggcaagttgtcgaagttggagcactttgagacggatgaaaag
gtgcggacaatctctctctttggggaagtttggggtgttggtccagctactgctctgaaa
ctctatgagaaaggacaccgctcactggatgatctgaagaatgaggataccttaacaaat
ggacagaagatagggttgaaatattttgacgatatcaagacgagagttccacgccatgag
gttcaagaaatggatttgcttttacagaaagctggagaagatgtattgcccggggtagtt
gttgtatgtggaggatcatacagacgtggaaaggctacatgtggtgatctagacattgta
attacacatcccgatggaaaaagtcataaaggatttttaagaaaatatgtgaagcatctg
aaagatattggatttttaagggaggatttgatctttggcattcacagtgaggaggatact
gattcaggggttgacacatactttggtctttgtacatatcctggtcgagaacaacgacat
cggattgacctcaaggtgtatccaagggatatatatgcatttggattaatagcatggaca
ggaaatgatgtactcaataggaggttaaggttaattgcagattcaaaaggctaccggctt
gatgatacagggctctttctggccactcagggttctggagggaaacggggtgcaagatct
agcatgagtttgagctttaaaacagaaaaggaagtgtttgatttcttgggatttccttgg
cttgaacctcatgaaaggaatttgtaa
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