Macadamia integrifolia (macadamia nut): 122077370
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Entry
122077370 CDS
T07436
Name
(RefSeq) sister chromatid cohesion 1 protein 4-like isoform X1
KO
K06670
cohesin complex subunit SCC1
Organism
ming
Macadamia integrifolia (macadamia nut)
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ming03036
]
122077370
Chromosome and associated proteins [BR:
ming03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
122077370
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
CNDH2_N
Motif
Other DBs
NCBI-GeneID:
122077370
NCBI-ProteinID:
XP_042499236
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Position
4:648471..716964
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AA seq
1351 aa
AA seq
DB search
MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPEVPIALRLSSHLL
LGVVRIYSRKVNYLFHDCSEALLKVKQAFRSTVVDLPPDESTAPYHSITLPETFDLDDFE
LPDTALFQGNYVDHHVSTREQITLQDTMDGVVYSTSQFGLDERFGDGDTSQIGLDLDEDL
FLDKAAAAQHAEDMVSSVENVGPWPCGEPMKPFTGMFVVGDDSNTERTAEIPEVILVDGS
GKEIVSDAHERKMDDKCAIHNDQIRSPNHAEGFQYKQIEGQSANPMTDLVEFTLSPSTSA
LGEDAILVNVEEDPYKMASPCQSQDCNSINLAVTGKPGDSMKGPDVGNVNNALVCTLLNN
ENSGADVADVLCMPSGKNESLTGGVEAIHVKQQGNSTPSAEKCSDGIAAVLDGQEGVLSN
NGLGVHIFPIDQIHAKRMATQANAVDTTVAFPACSHEAIMLEDSCGRPPCDNDHVSFKET
FEPDALKSVELVGDGAESRSCTQELQSTIGFLSGSAGRHEVDQVEGNTSAQRQDSNILNR
YGPGEKCHAGSHALQPCSLQSNQLGVSSFPDGSSVENIPDMKCRGDGLCSTKTAEREEMP
QASALSADMQGEECNQGLDGHPIMEPFQPEDVQGLGKLDEHLDGVILEDTQTQTSNLSAS
SDLPAPETLLSVPAGADLRADVTVEPVPDEKNPTKGSGVVSKILSGKSCHLIESTPVLRS
GNSAELSGVSQSRNLDSIPDDNDLLSSILVGRRSSALKVRPTPPPEVPSSKRLRVATRAH
APKRKVLVDDTMVLHGDTIRQQLTNTEDIRRIQRKAPCTRPEIWMIEKQLLENEIFNEPI
FTGMSMQLIGLQNRTSDSSKAGLSQIDANCTPLGVQKCREYAVRINVAEENSLEDCTEDV
AVSNDGKVLPVGIHLQVEDQHSEEHAGLEGEAVLVTIEGEAQATSLDSSKDGKLEELHTM
DIDRVDGISDVVGHAATPGAKLAVPSGPLSGDNINLIACSLKLSPVDNSCEAEVILQNDE
EHSLKNQKLGFQPDEKGALIMGGNTGNDVHALHIVEANGKSSISPKAVPAAKDVSALVET
DGGMFSEFPQDCQIGGLENTSSAMAAAELDNSSVDARAYVQVDSSALSFENINSSLCLEN
GEQTAVVIVTRDQNIGGNNGLLDENEMSSEQARDEVGVTIGMEDAVLEPNVDLEDVSFHR
GEDPGCVGANQKNTTDAEICMLHSLGAGASDVFEDLIDENDTEFLNVDDDEAAEEEDNNM
PSAEEFFENSGWSSRTRAVARYLQTLFDDAGHEREVVRMDHLLAGKTRKESARMFFETLV
LKTRDYIQVEQESSFVNIKIKPRGKLMKANF
NT seq
4056 nt
NT seq
+upstream
nt +downstream
nt
atgttttattcgcagtttatattggccaagaaggggccacttggaaccatatggattgcg
gcacatttggaaaggaagcttcggaagaatcaggtggctgatactgatattggcgtctct
gtggactcaattcttttccctgaagtaccaattgctcttcggttgtctagccatcttcta
cttggggtggtgaggatatattcccgaaaggtgaattatcttttccatgattgcagtgag
gctttgcttaaggtaaagcaagcttttcgttccactgtggtcgatctgccaccggatgaa
tctactgcgccttatcactctattaccttgccagagacttttgatcttgatgatttcgag
ttgccagacactgcactttttcagggtaactatgtcgaccatcatgttagtacgagggag
cagattacacttcaagataccatggatggtgtggtctattccacttcacagtttggattg
gatgagaggtttggtgatggtgatacttctcagattggcttagatcttgatgaggacttg
tttttagataaagctgcagcagctcaacatgctgaagatatggtttcctctgtagagaat
gtgggtccttggccatgtggtgaacccatgaaaccattcactggcatgttcgttgttggg
gatgatagtaataccgagaggacagctgaaattccagaggtcatattggttgatggcagt
ggaaaagagatcgtttcagatgcccatgagcggaagatggatgataaatgtgccattcat
aatgatcaaattagaagcccaaatcatgctgagggctttcagtacaaacagatagagggc
caatctgcaaatcctatgacagatttggttgagtttactctgtcaccttcaaccagtgca
ttaggggaagatgcaatcctggtcaatgttgaagaggatccttataaaatggcttcacca
tgccaatctcaagattgcaattcaataaatttagcggtgacagggaaaccgggtgattct
atgaaaggaccagatgttggaaatgtgaacaatgcattggtgtgtactttgcttaataat
gagaattctggggctgatgtggctgatgtcctttgcatgcccagtgggaaaaatgagtct
cttacaggtggtgttgaggccatccatgtgaagcaacaaggaaattctacaccttctgca
gaaaaatgttcagacggaattgcggctgtgttggatggtcaggaaggggttttaagtaac
aatgggctgggtgttcatattttccctattgatcaaatacatgcaaaacgtatggccacc
caagcaaatgctgttgacacaactgttgcatttccagcttgttctcatgaagctatcatg
ctggaggactcctgtggtagaccaccttgtgataatgaccatgtttcattcaaggagact
tttgagccagacgctttgaagagcgtggaacttgttggagatggtgctgaatcacgttcc
tgtacccaagaattgcagtctactattggtttcctgtcaggatcagcaggcagacatgag
gttgatcaagttgaaggtaatacttctgcccagagacaagattccaatattttgaataga
tatggccctggtgaaaaatgtcatgctggcagccatgcgcttcagccatgcagtttacag
tccaaccaacttggtgtatcatctttcccagatggtagttcagtagaaaatatccctgac
atgaaatgcaggggagatggactatgctcaaccaagacagcagaaagggaggagatgccg
caggcttctgcactttctgctgatatgcaaggtgaagagtgtaaccaaggcttggatgga
catccgatcatggaaccatttcagcctgaagacgttcagggacttggcaagttagatgag
cacctggatggtgtcatactagaagacactcaaacacaaacttccaatctttcagccagt
tctgacttacctgcaccagaaacattgctttcagtaccagctggagctgatttacgagct
gatgtaacggttgaaccagttccagatgaaaaaaacccaaccaaaggaagtggggtcgtg
tccaaaatcctttctggtaaaagttgtcatttgatagaaagtacaccagttctacggagt
gggaattcagccgagctttctggggtgtcccagtcaagaaatttggattccattcctgat
gataatgatttgttgtcatccattttagttggaaggagatcttcagctttgaaagtgaga
cctactccgccacctgaagtaccatcttcaaaacgtcttcgagtagcaacccgtgcccat
gctcctaagaggaaggtgcttgtggatgataccatggtattgcatggcgatacgatacga
cagcaactgacaaatacagaggacatacgccgaatacaaaggaaggctccttgtacccgt
cctgaaatatggatgattgagaagcaattactcgaaaatgaaatcttcaatgaacctatt
ttcactggaatgtcaatgcagttgattggtttgcagaaccgaacctctgattcttctaaa
gctgggctttcccaaattgatgcaaattgcactcctttgggagtacaaaagtgtagggag
tatgcagtaagaataaatgttgctgaagaaaatagtttggaagattgcactgaggatgtt
gccgtcagtaatgatgggaaagttttacctgttggaatacatctccaggttgaggaccaa
cattccgaagagcatgctggcttagagggtgaggctgtactggtgacaattgaaggtgaa
gcacaagcaacttcattggactcatcaaaagatggaaagttggaggaattacataccatg
gacatagacagagttgatggaatttctgatgtagtgggtcatgctgccactccaggggct
aagctagcagtgccctctggtcctctatctggagataatattaatctgatagcttgttct
ctcaagttgtctcctgtggataacagttgtgaagcagaagttattctgcagaatgatgag
gaacattcacttaaaaatcagaaattgggcttccaacctgatgaaaagggtgctttaatc
atgggtggcaataccggcaatgatgttcatgcccttcatattgtggaagcgaatggcaaa
agctcaatttcaccgaaggctgtacctgctgcaaaggatgtgtctgcactggtggaaacc
gatggtggcatgttctcagagtttcctcaagactgccagattggcgggttggagaatact
tcctctgcaatggctgctgctgaattggacaacagttcagttgatgccagggcttatgta
caagtagattcctctgccctctccttcgaaaatattaattcttccttgtgcttggaaaat
ggtgagcaaactgctgtagttattgtaactcgtgaccagaacattggagggaataatggg
cttttagatgagaatgaaatgagttctgaacaagcaagggatgaagttggtgtgactatt
ggcatggaagatgctgtattagaacctaatgtggacttggaagatgtttcctttcatcga
ggagaagatcctggttgtgtgggtgccaatcaaaagaacactacagatgctgaaatctgc
atgttacatagtttaggtgctggagcttctgatgtttttgaggatttaatagatgagaat
gatacagagtttcttaatgtagatgatgatgaagcggctgaagaagaggacaacaatatg
ccaagtgctgaagagttttttgagaacagtggttggtcttcccgtacaagggctgttgct
aggtatctccaaaccttgttcgatgacgctggccatgaaagagaagttgttcgtatggac
cacctcctggctggtaaaacgcggaaagaatcagctaggatgttttttgagactctggtt
cttaaaacaagggactacatccaggttgagcaagagagttcatttgtcaacatcaaaatc
aagcctagaggaaagctaatgaaagcaaacttttga
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