Macadamia integrifolia (macadamia nut): 122077530
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Entry
122077530 CDS
T07436
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH14 isoform X1
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
ming
Macadamia integrifolia (macadamia nut)
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ming03400
]
122077530
Enzymes [BR:
ming01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
122077530
DNA repair and recombination proteins [BR:
ming03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
122077530
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
WHD_SNRNP200
DExH14_plug
ResIII
Helicase_C
AAA_30
T2SSE
AAA_19
DEXQc_Suv3
Tc-R-P
DUF8248
Motif
Other DBs
NCBI-GeneID:
122077530
NCBI-ProteinID:
XP_042499423
LinkDB
All DBs
Position
1:complement(23226..162270)
Genome browser
AA seq
2126 aa
AA seq
DB search
MIFGSLSFWVRDLIKSGKGECKVRTVTKGLSTGNREIMLIQLPRLTNSLRDPYDVDQAYL
QRRVILQNQKAHKPGNSLDDSELARKIVPRWGEASSEVRQAYKQFIGAVVEFIDGEVVSE
EFREVARTTYNLFRNPGEDWDDISRIAEKGELQELLGYSVSDINMRKVATMAKRLSALQP
CEQGVEREMDGNLIEFGSDLVFNAPARFLVDVPLENGELLDYELPSTSTSLHEEWHDNNE
STNHHSRVDRGTMNLRWLRDACEHIVRGNSSQLSVDELSMALCRVLDSDKPGDEIAGDLL
DLVGDSAFETVQDLLLHRKELVDAIHHGLLMQKSEKTTSNLQPRMPSYGTQVTIQTESEK
QIDKLRRKEEKRHRRGSEHGLENDLSVGGFSSLLKASERKSPFDDLVGSGESLSVSSLPE
GTVRKHCKGYLEVRIPPTPTAPMKPGEKLMEIKELDDFAQAAFHGYKSLNRVQSRIFQAT
YHTNENILVCAPTGAGKTNIAMIAILHEIGQHFKDGFLHKDEFKIVYVAPMKALAAEVTS
TFSHRLSPLNLAVRELTGDMQLSRKELEETQMIVTTPEKWDVITRKSSDMSLSMLVKLLI
IDEVHLLNDDRGPVIEALVARTLRQVESTQTMIRIVGLSATLPNYLEVAQFLRVNPETGL
FFFDSSYRPVPLAQQYIGISEQNFAARNQLLNTICYNKVVESLKQGHQAMVFVHTRKDTV
KTARTLIEFSQKEGELELFSTETHPQFQLVKKEVQKSRNKEVVEFFESGVGIHHAGMLRG
DRGLTERLFSGGLLKVLVCTATLAWGVNLPAHTVVIKGTQLYDPKAGGWRDLGMLDVMQI
FGRAGRPQFDKSGEGIIITSHDKLAYYLRLLTSQLPIESQLISSLKDNLNAEVALGTVTN
VKEACAWLGYTYLFIRMKSNPLAYGIGWDEVIADPSLISKQRALVIDAARALDKAKMMRF
DEKSGNFYCTELGRIASHYYIQYSSVETYNEMLRRHMNDSELINMVAHSSEFENIVVREE
EQDELEKLTRTSCPLEVKGGPSNKHGKISILIQLYISRGSIESFSLISDAAYISANLARI
MRALFEICLRRGWCEMASFMLEYCKAVDRQIWPHQHPLRQFDRDLSAEILRKLEERGADL
DRLMEMEEKEIGALVRYAPAGKLVKQYLGYFPWLNLSANISPITRTVLKVDLLITPDFIW
KDRFHGASLHWWILVEDSENDHIYHSEFFTLTKRMVAGESQKLSFTVPIFEPHPPQYYIR
AVSDSWLQAEAFHTISFQNLALPEAYTSHTELLDLKPLPVTALGNRAYEDLYKFSHFNPI
QTQTFHVLYHSDNNVLLGAPTGSGKTISAELAMLHLFNTQPDMKVIYIAPLKAIVRERMN
DWRKRLVSQLGKKMVEMTGDFTPDLTALLSADIIISTPEKWDGISRNWHSRSYVMKVGLL
ILDEIHLLGADRGPILEVIVSRIRYISSQTERAVRFVGLSTALANARDLADWLGVGDIGL
FNFKPSVRPVPLEVHIQGYPGKFYCPRMNSMNKPAYAAICTHSPTKPVLIFVSSRRQTRL
TALDLIQFAISDEHSRQFLHMPEEALQMVLSQVTDQNLRHTLQFGIGLHHAGLNDKDRSL
VEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEYYDGRTKRYVDFPITDILQMMGRA
GRPQYDQHGKAAILVHEPKKSFYKKFLYEPFPVESSLREHLHDHINAEIVSGTICHKEDA
VHYLTWTYLFRRLVVNPAYYGLEDTETRTLNSYLSSLVQNTFEDLEDSGCIKIDEDSVDP
LMLGSIASQYYLSYLTVSMFGSNIGADTSLEVFLLILSGASEYNELPVRHNEENYNEALS
EKVRYLVDKNRLDDPHVKANLLFQAHFSQLELPISDYVTDLKSVLDQSIRIIQAMIDICA
NSGWLASALTCMHLLQMVMQGLWFDHDSSLWMLPCMNAGLASTLSKEGISDVQQLLDLPE
KALQMLVGNFPASQLYQDLQLFPRVKVRLQLKRRDSEDAKHVILNIKLEKKNSKCKTSRA
FAPRFPKLKEEAWWLVLGNVSTLELYALKRVSFSGSLFTHMDLPSTAINLPGTKLIVVSD
CYLGFEQEYLIGPSNHANRNQDREYT
NT seq
6381 nt
NT seq
+upstream
nt +downstream
nt
atgatatttggttcattgtcattttgggttcgtgatctcattaaaagtggaaaaggcgaa
tgcaaagtacgaactgtgacaaaaggtttaagcacaggaaatagagaaataatgctgatt
cagttgccgcgtttgacgaattccttgagagacccatacgatgttgatcaagcctatctg
caacgcagagtgattctccaaaatcagaaagctcacaaacctggaaactcgctcgatgat
tcagaacttgcgaggaagatagttcctcgatggggggaagcctctagtgaagttcgtcaa
gcatacaaacaatttattggtgcggtcgtggagttcattgatggagaagtggtctcagaa
gaatttcgagaagtggcaagaaccacttacaatctcttcagaaatccaggagaggattgg
gatgatattagtaggatcgcagagaagggagaattgcaggaacttcttggatacagtgtt
tcagatatcaatatgcggaaagttgctacaatggctaaaaggctttctgctttacagcct
tgtgaacaaggggttgaaagggaaatggatggaaatttgatcgaatttggctctgatctt
gttttcaatgcaccagctcggtttctggttgatgtacctttggagaatggggagttgttg
gattacgaacttccttctacttctacttcacttcatgaggaatggcacgataataatgaa
tctacaaatcatcattctcgggttgatcggggaactatgaatttaagatggttaagggat
gcatgtgagcatatagtgaggggaaattcttcacagctttctgtagatgaactttcaatg
gcgctttgccgggtgcttgattcagacaaacctggtgatgagatagctggcgacttattg
gaccttgttggggatagtgcctttgaaacagttcaagaccttctgttgcaccgaaaggaa
cttgttgatgctatccatcatgggttgcttatgcaaaaatcggagaagacaacctcaaat
cttcaaccccggatgcctagctatgggactcaggtcacaattcaaactgaatctgagaag
caaattgataagcttcggcgcaaggaggaaaaacggcataggcgtgggtcagaacatggg
cttgagaatgacttatctgtgggaggtttttcttctttactcaaggcaagtgagagaaaa
agtccttttgatgatttggttggaagtggcgaatcgttgtcagttagttctcttcccgag
ggaactgtgaggaagcactgcaagggctatctggaagtccgtattccaccgacaccaaca
gcaccaatgaaacctggggagaaactgatggagataaaagagttagatgactttgctcag
gctgcttttcatggttacaaatctctgaaccgggttcagagccggatattccaggcgact
tatcacactaatgaaaatatactggtttgtgctccaacaggagctggcaagacaaatatt
gctatgattgccattctgcatgagattgggcagcactttaaggatgggtttttgcataaa
gatgaatttaaaatagtctatgttgctcctatgaaggcactcgctgctgaggtcacatcg
acatttagccatcgtttatctcccttaaatttggctgtcagagagcttactggagacatg
caactttctaggaaagaacttgaggaaactcagatgatagttacaactccagagaaatgg
gatgtgatcactcgcaaaagcagtgatatgtcgctgtcgatgctagtgaaactcttgatt
attgatgaggtacatctgttgaatgatgacagaggccctgtgatagaggcactggttgct
cggacccttcgccaggttgagtcaacacagactatgatacgcattgtgggcctttcagct
actctacccaattatttggaggtagcacaatttttgagggtgaatcctgaaacgggactc
ttcttcttcgattctagctaccgtccagtgcctcttgcacagcagtatattggaatcagt
gagcagaattttgctgctcgcaaccagctactcaatacgatatgctataataaggttgtt
gagtcattgaagcaaggccatcaggcaatggtttttgttcatacaagaaaggacacagta
aaaacagcaaggacactgattgaattttcccaaaaggagggtgagctggaattatttagc
actgaaacacatccacagtttcaacttgtcaagaaggaagtgcagaaatccaggaacaaa
gaagtagttgaattttttgaatctggggttggtattcaccacgcagggatgttgcgtggt
gacagaggcttgaccgagcgccttttctctggtggtctcctgaaggttcttgtttgcaca
gcaactttggcatggggagtaaatctaccagcccacactgtcgtcataaagggtacccaa
ttgtatgacccaaaggctggtggatggcgagacctaggaatgcttgatgtaatgcagatc
tttggaagagctgggagacctcagtttgataaaagtggtgaaggcattatcatcacttca
catgacaagctggcttactatctgcggctgctgacgagtcaactacccatagaaagtcag
ttaatcagctccttgaaggataatttgaatgcagaagtggctttgggtactgtcacgaat
gttaaggaagcttgtgcttggcttggctatacatatcttttcatcaggatgaagtcaaat
cctttggcgtatggaataggatgggatgaggtcattgcagatccctctttaatatcaaag
cagagagcacttgtaatagatgctgcacgtgcacttgacaaggcaaaaatgatgcggttt
gatgagaaaagtggaaatttctactgtactgagcttggccgcattgcaagccattattat
attcagtactccagtgttgaaacttacaacgaaatgctgaggcgtcacatgaatgacagt
gagttaattaacatggttgctcattcttctgagtttgagaatattgttgtaagagaagag
gagcaggatgagctagaaaagttaactcgtacctcatgtcctctagaagttaagggtggt
ccttcgaataaacatggaaaaatttcaatcctcattcagttatacatatcacgaggatca
atcgagagcttttctttaatttctgatgctgcatatataagtgcaaacttggcccgcata
atgcgggctttatttgaaatttgtctgcgtagaggatggtgtgagatggcgtctttcatg
ttggaatactgcaaagctgtggatcgccaaatttggccacatcagcatcccctcagacag
tttgatagggatctttcggctgaaatactgaggaagcttgaagaacgaggagctgacttg
gatcgccttatggaaatggaggaaaaagaaattggagcactagttcgttatgcacctgct
ggaaaattggtaaagcaatatttgggatatttcccgtggctcaacttgtcggcaaatata
agtcctatcacaagaactgttcttaaggtggatttgcttataactccagacttcatttgg
aaggatcgctttcatggtgcttctctacattggtggattcttgttgaggattctgagaat
gatcatatctatcattcggagttcttcacgttaacaaagcggatggtagcaggagaatcg
caaaagctatctttcactgttcctatttttgagccgcatccacctcagtattacattcgt
gctgtttctgattcttggttgcaagctgaagcttttcataccatctcttttcagaatcta
gccttgccagaggcttatacatcccacactgaacttcttgatttgaagccacttcctgtg
actgcacttggcaatagggcttacgaggacttgtataagttttcacacttcaatccaatt
cagactcagactttccatgtcctttatcactcagacaacaatgttctattgggagctccg
acaggaagtggtaaaactatatcagctgaacttgcaatgcttcatcttttcaatactcaa
ccagatatgaaggttatctatatagcacctttgaaggccattgttcgggaaagaatgaat
gattggagaaagcgtcttgtttctcagcttggaaaaaagatggttgaaatgactggggac
tttactccagatttaacggcactgttatcagcagatatcataatttctactcctgagaag
tgggatggtattagtcgtaattggcatagtcgaagctatgtgatgaaggttgggctcctt
atattggatgagattcatttacttggggctgatcgtggacccattcttgaggttattgtc
tccaggatacgatatatatcatcacaaacagagcgtgctgtgcggtttgtaggcctctca
acagcattagcaaatgcacgtgatttagctgattggttgggtgttggagacattggacta
ttcaacttcaagcctagtgtgaggcctgtacctcttgaagttcacatccagggataccct
gggaagttctactgccctagaatgaatagtatgaacaaacctgcatatgctgcgatatgt
acccattcaccgaccaaacctgttcttatttttgtttcatctcgtcgccaaacaaggctt
actgcgctagacctcattcagtttgcaatttcagatgaacattctaggcagttccttcat
atgccagaagaagcattgcagatggtactttctcaggttactgatcagaacctaaggcac
actttacaatttggaattggattgcaccatgcaggattgaatgataaagatagatctctg
gttgaggaactttttgcaaataacaagatccaggttctggtatgcaccagcacattagca
tggggtgttaatcttccagctcatctggttattatcaagggaactgaatattatgatggg
aggacaaaaagatacgttgattttcccattacagatatcttacaaatgatgggacgtgct
ggccgaccacagtatgaccaacatggaaaagcagcaattcttgttcatgaacccaaaaag
agcttctacaagaagtttctttatgaaccattcccagttgagagtagtttgagggagcac
ttgcacgatcacattaatgcagagattgtttcagggacaatttgccataaagaggatgcc
gtgcactatcttacatggacttacttgtttcgccgattggttgttaacccagcctactat
ggattagaggatacagaaaccagaactttgaattcatacttgtcaagcttggtgcaaaac
acctttgaggatctggaggatagtggatgcatcaagatagatgaagacagtgtggatccg
ctaatgttggggtcaatagcatctcagtattaccttagctacctgactgtatcaatgttt
ggctcaaacataggcgcagatacatcacttgaagttttcctgcttatactctctggtgct
tctgagtacaatgaacttcctgtccggcataatgaggaaaactataatgaagcattatca
gagaaagttcgatatctggtggataagaatcgcctagacgatccacatgtcaaagcaaat
cttctttttcaggcacatttctcacagttagaattgccgatcagtgactatgttactgac
ttaaagtcagtgttggatcaaagcatacgtatcattcaagctatgattgatatttgtgcc
aacagtggatggcttgcaagcgcattaacttgtatgcatcttttgcagatggtcatgcag
ggtttatggtttgatcatgattcttctctatggatgttgccatgcatgaatgctggtctg
gcaagtaccctttcaaaagaaggtatttcagatgtgcagcaactattagatcttcctgag
aaagctttgcagatgctagttggaaatttccctgcttcacagttatatcaggacctgcag
cttttcccacgtgttaaagtgagattgcagcttaagagaagagactcagaggatgcaaag
catgtcatcctcaacattaaattggagaaaaaaaactctaaatgcaaaacatcaagagca
tttgctcctcgattcccaaagctaaaagaggaagcatggtggttggttcttgggaatgtg
tcaacgttagaactatatgcactgaagagagtctccttctctggcagcttgttcactcac
atggatttaccatcaacagcaattaatctcccgggtacaaaactgattgtagtttctgat
tgttatcttggatttgagcaagagtacttgattggacccagcaaccatgccaatagaaat
caagatcgagagtacacatga
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integrated database retrieval system
