Macadamia integrifolia (macadamia nut): 122077755
Help
Entry
122077755 CDS
T07436
Name
(RefSeq) probable polygalacturonase At3g15720 isoform X1
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming00040
Pentose and glucuronate interconversions
ming01100
Metabolic pathways
Module
ming_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
122077755
Enzymes [BR:
ming01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
122077755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
122077755
NCBI-ProteinID:
XP_042499546
LinkDB
All DBs
Position
5:complement(30331729..30336951)
Genome browser
AA seq
402 aa
AA seq
DB search
MDRFTIFLILCMVLLHSSNGFDATVSDSFNVVKYGAVGDGKTDDSGAFLKTWTAMCGIAP
TYTPTLIIPSKKTFLLKPMKFGGPCNLHHNINIKVSGNIVAPYTISGYEGHDDIWLLFTS
IDRLNIYGTGQIDGRGSIWWPNSEQRRPTALCFHKCNSLHLTGLKLLNSPRNHISLLGCN
GVTISHLNIIAPKDSPNTDGIVIADSTQVLIHRSHIGTGDDCVAIIGGTSFINITNLRCG
PGHGISVGSLGGGGAHDTVKEVHVNDCSFHRTMNGARIKTWPGGSGYAKKISFKKIALTE
VGNPIVINQYYPKNEVPYPQDINKGSDVEVSDVTFIGFQGSTTSKNAISLRCSNSVACTN
IVLNHINITSAIPGNKTSSICNNAHVISKDCNPPVHCPSQKF
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggatcgcttcaccattttcttgattttatgcatggttttactccattccagtaatggg
tttgatgctacagtatcagattcttttaatgtggtaaaatatggagctgttggagatggc
aaaactgatgactcgggggcctttctaaaaacatggactgcgatgtgtggaattgctcct
acgtacactcctacactcatcataccttctaaaaagacattcttgttgaagcctatgaag
ttcggtggtccttgcaacctccaccacaacatcaatattaaggtttctggaaacatagtt
gcaccatatactatttcaggatatgagggacacgatgatatatggcttttattcactagt
atagatcgcctcaacatctatggaactggccaaattgatggccgaggtagtatttggtgg
ccaaattctgaacaacgacgacctacggcactatgtttccacaaatgcaatagtcttcac
ctgactggactgaagcttttgaacagtccaagaaaccatatctccctccttggctgcaat
ggagtaactatttctcacctcaatatcattgcaccaaaagacagcccaaacacagatggt
attgtcatagcagactcaactcaagttctgatccatcgttctcacattggcacaggagat
gattgtgtggccattattggtggtacctcttttatcaacattacgaatcttagatgtgga
ccaggccatggcataagtgtgggaagcttaggaggaggtggagctcatgatacagtaaaa
gaagtccacgtgaatgactgtagtttccatagaaccatgaatggagcaaggatcaaaaca
tggccggggggttctggatatgctaagaagatctcttttaaaaaaattgcacttacagaa
gtaggcaaccccatcgtcatcaaccaatattatcctaagaatgaagttccctatccacaa
gatataaataagggttcagacgttgaagtgagcgacgtgacattcataggatttcaaggg
tctacaacttcaaaaaatgccatctcattgaggtgtagtaacagtgtggcttgcaccaac
attgtactgaaccatatcaatatcacatcagcaattccagggaataagacttcctccatt
tgcaataacgcccatgtaatatctaaagattgtaacccacctgtacattgtccatctcaa
aagttctga
DBGET
integrated database retrieval system
