Macadamia integrifolia (macadamia nut): 122077814
Help
Entry
122077814 CDS
T07436
Name
(RefSeq) sister chromatid cohesion protein SCC2-like
KO
K06672
cohesin loading factor subunit SCC2
Organism
ming
Macadamia integrifolia (macadamia nut)
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ming03036
]
122077814
Chromosome and associated proteins [BR:
ming03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
122077814
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
PDS5
Cnd1
PHD
PHD_2
zf-C3H2C3
Motif
Other DBs
NCBI-GeneID:
122077814
NCBI-ProteinID:
XP_042499640
LinkDB
All DBs
Position
5:26384313..26457831
Genome browser
AA seq
1771 aa
AA seq
DB search
MSSSGSWNHRSFGPEKACRLSNTVHSEVAPCLPLPSLPVFCGAVHHELRLFDESSGASSL
NRTDVLAQASKIADLLRDTDVSYLNLRDSTNPPPYSFAEAPEPSVLFNEVLQHNSEAFEY
SVPGLIQEPKCSSSAYGKKPFKQNAPIVSHAQRDYGETSDHSLGGNLVNDLPNSVSSKKP
KVKKKGSDDISVTSGPDSSEIQEGIIKGFCKVVEALCLRAESLNDDEDEAEWISLPLADL
KILVNEVISIRAKKILHLVPVDSFVKLLNVLDRQIHHADGLSIVENENDESDIVSVVMCG
LESTHVALAVMAHHDMPKQLYKEEIIERIMDFSRHQIMECMSACDPSYRALHKPSENGAL
VGEDDEEDDTEFGSANKKRRSIKSVKMKKSTINKVSAAVNALLQKLCTILGFLTDLLSIE
RLSDSCILQLVKTSFGTLLVDNIQLLQLKAISLICGVFSSYTQHRNFLIDETVQLLWKLP
SSKRALRTYYLPAEEQKQIQMITALLIQLVQCSANLPEALRQTQTGSRILEVSIDASFPT
KCHEAATEACCLFWSHVLQRLTTAKSHEASELKLMLENFVMDLLTTLNLPEYPASALILE
VLCVLLLQNAGLKAKDISARSMSIDLLGTIAARLKRDAVLCHTDKFWIVQELADGDGDDH
VYPKDVCSVCLDGRGGKMAFVCHDCKRLFHTDCMGVTEHEVPTCGLYCQFCLCKKQLIVL
QSYCKSQCMDDGKKNQHVSERTSETSEPITKLEIVQQMLLNYLQEASSAEDACLFARWFY
LCLWYKDDPKSQEKLIYYLSRLKSKAIVRDFGTLSSLLTRDSVKKISLALGQNNSFSRGL
NKILYLLLASLGESSPIIRAKALRAVSIIVEADPEVLCEKNVQLAVEGRFCDSAISVREA
ALELVGRHIASHPDVGLKYFEKVAERIKDTGVSVRKRAIKIIRDMCSSNANFSEFTSACI
EIISRVSDEESSIQDLVCKTFYEFWFEESSGFPTQFVGDGSSVPLEVAKKTEQIVEMLRK
MPNHQLLVTIIRRNLALDFFPQSAKAAGINPVSLASVHKRCELMCKCLLERILQVEETIH
EDVEMRALPYVLALHSFCIVDPTLCAPSSDPSQFVVTLQPYLKSQADNRAIAQLLESIIF
VIGAVLPMLRKLPQSVIEELEQDLKQMIVRHSFLSVVHACIKCLCSLSKVAGKGASVVEY
LIQVFLKRLDVLGVDNKQQVGRSLFCLGLLVRYGNELLVSSNNRNMDVVKSLSLLKKYLS
SEDFVIKVRSLQALGFVLIARPEYMLEKDVGKILEASLSSGCDARLKMQSLQNIYEYLLD
AESKMGNDKTANNVVHHPEGGHSVPVAAGAGDTNICGGIIQLYWNNILQRCLDVNELIRQ
CALKIVEVVLRQGLVHPITCVPYLIALETDSQETNAKLAHHLLMNMNEKYPAFFESRLGD
GLQMSFGFIHSISENSHECSNQSKVSGNLKGRSDSISFGHARLGVSRIYRLIRGNRVSRN
KFMSSVVRKFDSPSGNNSLIPFLMYCTEILASLPFTTPDEPLYLIYTINRVVQVRAGALE
ASMKAFTSRFTQMDTHSVPIENGVIQKESAGHTITSLAVLEDIKGHHSVRSPASNEISED
DLQKIQAECHAAAALQLLLKLKRHLKIVYSLNDARCQAFSPNEPLKPGEVLSKQNVPFNI
SETRINFPASYEEVIERYQELKATLKEDTVDYSTYTASVKRRRPPARNSRGGKSGREPSA
YDEDDIYDEDWTGSAQRLNYTARRGSGSRGR
NT seq
5316 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagctccggcagctggaaccaccgaagtttcggccctgagaaggcttgccggctt
tcgaatacagtacactcggaagttgcaccttgcttgcctttgccgtcacttccggttttc
tgtggtgccgttcatcacgagcttcgactattcgatgaatcgagtggtgcttcgtcgttg
aataggacggatgttcttgctcaggctagtaagattgctgatctgctcagagacactgat
gtttcttacctgaaccttagagattccacaaatcctcctccgtacagctttgcagaggca
ccagagccttctgtgctttttaatgaagttctccagcacaattctgaagcatttgagtat
tctgttccaggtcttatccaagagccaaagtgtagtagttcagcatatggaaagaagcct
ttcaaacaaaatgctccaattgttagtcatgcccaaagagattatggagaaacttctgac
cattccttgggcgggaatcttgttaatgatctaccaaattctgtttcttcaaagaaaccc
aaagtcaagaagaaaggaagtgacgacatctctgtcacaagtgggccagattcttccgag
atccaagagggcatcatcaaaggcttttgcaaggtggtggaggccttgtgtttgagagca
gaatctcttaatgatgatgaggacgaagcggaatggatttcattgcctcttgctgacctt
aaaattcttgtaaatgaagtcatttctatccgtgcaaagaaaattctacacctggttcct
gtggatagttttgtaaaacttctaaatgttctggatcgtcaaattcatcatgcagacgga
ttgtccattgttgaaaatgaaaacgatgaatcggatattgtctcggtagttatgtgtgga
ttggagtccactcatgtagctttagctgtgatggctcatcatgacatgccaaagcagctc
tacaaagaagagattattgaaagaattatggacttctctcggcatcagatcatggaatgc
atgtcagcttgtgatccatcataccgtgcactgcataaaccgagtgaaaatggagctctt
gtgggagaggatgatgaagaagatgatactgaatttggttctgcaaacaagaagcgacga
agtattaagagtgttaaaatgaagaagtcaaccattaacaaggtttctgctgctgttaat
gcgcttctccagaaactttgcaccattcttggtttccttacggatcttctgtccatagag
cgcctatcagatagttgcatcctacagttggtgaagacaagctttggaaccttattggtg
gataacatccagctcttgcagttgaaggccatcagtttaatctgcggggtattttcttca
tacacacagcataggaattttttgatagatgaaacagtgcagttgctttggaagctacca
tcttctaagcgagctcttaggacttactatctaccggctgaagaacaaaagcaaatacag
atgatcactgccttgctgattcagttagttcagtgtagtgcaaaccttcccgaagcattg
aggcaaacacaaactggcagtcgaatcttggaggtttcaattgatgctagttttccaacc
aagtgccatgaagctgccactgaggcttgttgtcttttttggtctcatgttcttcagaga
cttactactgcaaaatctcatgaagcttctgagttgaagttgatgttagaaaattttgtt
atggatcttctgacaacattgaacttacctgaatatcctgcttctgctcttattcttgag
gttttatgcgtcttattgctccagaatgctggacttaaagccaaagatatatctgcacgt
tccatgtccattgaccttcttggaacaattgctgcgaggttgaagcgggatgctgtcctc
tgccatacggataagttctggattgtacaggagttggctgatggagacggggatgatcat
gtgtatccaaaagacgtttgttcagtatgtcttgatggaaggggtggaaagatggcattt
gtttgtcatgattgtaagagattgtttcatacagattgcatgggagtaacagaacatgaa
gttcctacctgtggtttgtactgtcagttttgcctctgtaagaagcagctgattgtttta
caatcatattgtaaatcacagtgcatggatgatgggaaaaagaatcaacatgtgtcagaa
agaacttctgaaacttcagaaccaattacaaaattggagattgttcaacaaatgcttttg
aattacctccaggaagccagttctgcagaagatgcatgtctttttgctcggtggttctat
ctttgcctatggtacaaagatgaccccaaatcacaggagaagttaatttactaccttagt
agactcaagtcaaaagcaattgtgcgggactttggcactctttcttctttactaacaagg
gattcagtgaaaaagatatctttagcgttggggcaaaataattctttctcgagaggattg
aataaaattctttatttgcttttggcaagtttaggagagagctctcctataataagggcc
aaagcattgcgtgcggttagtataattgttgaagctgatccggaggttttgtgtgagaaa
aatgttcaattggctgttgaaggaaggttttgtgactctgcgatctctgttcgagaagct
gcattggaacttgttggtaggcatattgcttcacatcctgacgttggattgaagtatttt
gaaaaagttgcggagagaataaaggatactggagtcagtgttcgcaaacgagctatcaaa
ataatcagggatatgtgttcttcaaatgcaaacttttcagaattcacgagtgcctgcatt
gagataatttctcgtgtcagtgatgaagaatctagtatacaggatcttgtctgcaagaca
ttttatgagttctggtttgaggagtcttctggtttccctactcaatttgttggagatggt
agttctgttccattggaagttgcaaaaaagactgagcagattgttgagatgttgaggaag
atgcccaatcatcaacttcttgtgacaatcatacggcgcaatctagcacttgattttttt
ccacaatctgctaaagctgctggaattaacccggtatcacttgcatcagtacataaacgt
tgtgagttaatgtgcaagtgcttattggaaaggatattgcaggtagaggaaacaattcat
gaggatgtggaaatgcgtgcacttccttatgtgttggctttgcattcattttgtattgtg
gacccaacactctgtgcaccatcttctgatccatcacagtttgtggttactctgcagcca
taccttaagagccaggctgataatcgagcaatagcacaactgctggagagtataatcttt
gtaattggtgctgttctacctatgctcagaaagcttcctcaaagtgttattgaagaactt
gaacaagatctgaagcagatgattgttcggcattcgttcttgtcagttgtccatgcttgc
atcaagtgcctttgctcattgagtaaagtagcggggaaaggtgccagtgtagttgaatac
ctaattcaggttttcttgaaacgtttggatgtccttggggttgataataagcagcaagtt
ggtcggtcgcttttctgtctggggctgttagtgcgatacggcaatgagttactagtttcc
tcaaataaccgaaatatggatgttgttaagagcctgagcttgctaaaaaaatatctttct
tcagaggattttgtcataaaggtccgatcattacaggcattaggatttgttctaatcgct
cggcctgagtatatgttggagaaggatgttgggaaaatattagaagcatcactatcttct
ggttgtgatgctcgtcttaagatgcagtcattgcaaaacatatacgaatatcttcttgat
gctgaaagcaagatgggaaatgataagactgccaataatgtggtccaccatcctgaaggt
ggtcatagcgtccctgttgctgctggcgctggtgatactaacatttgtggtggaataatt
caattgtattggaataatatcttgcaaagatgcttggatgtgaatgaattaattcgtcag
tgtgcccttaagattgtggaggttgtgctacgacaaggtctggttcacccgattacctgt
gttccataccttatagcacttgaaacagattcacaggagacaaatgcaaaactggcacat
catttgctaatgaacatgaatgagaagtatcctgccttctttgaaagccgtttaggtgat
ggccttcagatgtcctttggttttatccactccatttctgaaaactctcatgaatgttcc
aatcaaagcaaagtatctggaaacctgaaggggcggtctgatagtatctcttttggtcat
gcaagacttggagtttctcggatctacaggcttattcgtggaaatcgtgtttctagaaac
aaatttatgtcctctgttgtgcgtaaatttgattctccatctgggaacaattcattgatc
cccttcctgatgtactgcacagagattctcgcttccctgccatttacaacaccagatgag
cctctttacttgatctacactatcaaccgagtcgtacaagttagggctggggcacttgag
gctagcatgaaagcctttacttcacgtttcacgcaaatggacacacattctgttcctatt
gaaaatggggtaattcagaaagaatcagctggtcacaccattactagtctcgctgttctc
gaggacataaaagggcatcattctgtaaggtcacctgcttctaacgaaatctctgaagat
gacctgcaaaaaatccaggctgaatgtcatgctgcagcagctttgcaactccttttgaag
ctaaagaggcacttaaaaattgtgtatagtctaaatgatgcccgatgtcaggcattttct
ccaaatgaacctctaaaaccaggggaagttctatcgaagcagaatgttccctttaacatc
agtgaaacgcgcatcaattttcctgcttcttatgaagaagtgattgagagataccaggaa
ctcaaggctacattgaaggaagacaccgtcgattactccacctacacagctagtgtgaag
aggaggcgccctcctgctcggaactctagaggtggaaaatctggccgtgagccaagtgca
tatgatgaagatgacatttatgatgaagattggactggttcagcacaaaggctgaactac
actgcccggagaggcagtggcagtagagggaggtag
DBGET
integrated database retrieval system
