Macadamia integrifolia (macadamia nut): 122078560
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Entry
122078560 CDS
T07436
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 51-like
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
ming
Macadamia integrifolia (macadamia nut)
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ming03041
]
122078560
03009 Ribosome biogenesis [BR:
ming03009
]
122078560
Enzymes [BR:
ming01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122078560
Spliceosome [BR:
ming03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
122078560
Ribosome biogenesis [BR:
ming03009
]
Eukaryotic type
90S particles
Helicases
122078560
Pre-60S particles
122078560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Motif
Other DBs
NCBI-GeneID:
122078560
NCBI-ProteinID:
XP_042500526
LinkDB
All DBs
Position
5:complement(18184777..18194680)
Genome browser
AA seq
590 aa
AA seq
DB search
MTAKDERLHSKNEEEKNKKRKRKRANKKTLMDSDMEKTNVEAECEDNVEEEEEEEEDTKP
AAEGNQNMPEGEGESDGEKFTDTVAVKQKKKKLQSGSGIMSSQSFSQLSISEPTMKAIKD
MGFENMTEIQARAIPPLLEGKDVLGAARTGSGKTLAFLVPAIELLYHIHFSSRNGTGVVV
ICPTRELAIQTHAVAKDLLKYHSQTLGLIIGGAARRGEAERLVKGVNLLVATPGRLLDHL
QFTKGFIYKNLKCLMIDEADRLLEANFEEEMKKIIKILPKERQTALFSATQTKKVEDLAR
LSFQTTPVYIGVDDGRKKVTNEGLQQGYCIMPSAKRFILLYSFLKRNLSKKVMVFFSSCN
SVKYHADLLRYIQVDCLDIHGKQKQQKRTSTFFEFCKAEKGILLCTDVAARGLDIPAVDW
IVQYDPPDDPKEYIHRVGRTARGEGGRGHALLFLIPEELQFLRYLKAAKVPVKEYEFDEK
KLKNVKSQLEKLVAENYYLNKSAKDAYRSYILSYNSHSLKDIFNVHRLDLQAVATSFGFS
CPPKVNLNIDSSASKFRKKIRKVEGTRNGFSENNPYGRKVEDDKRQFVRY
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgactgcaaaagatgaaaggcttcacagtaagaatgaagaggaaaagaataagaagaga
aagagaaagagagctaacaagaagacactcatggattcagatatggagaagactaatgta
gaagctgaatgcgaagacaatgtggaagaagaagaagaagaagaagaagacacaaaacct
gcagcggaggggaatcaaaacatgcctgagggtgagggcgagagcgacggggagaaattt
acagatacagtggctgtgaagcagaagaagaagaaattgcagagtggatcaggaatcatg
agcagtcagtctttctctcagttgagcatctcagaacctaccatgaaagccattaaagac
atgggcttcgagaacatgaccgagatacaagctagagcaattccaccacttttagaaggg
aaggatgttcttggagcagcgagaacaggctccggaaaaacccttgctttcctagtacct
gctattgaattgttgtatcacatccatttttcttctcgtaatggtactggagttgttgtt
atttgcccaacaagggaacttgcaatacagactcatgctgtggcgaaggaccttctcaag
tatcactcacaaactctagggctgattattggtggtgcagctcgaaggggagaagcagag
cgtcttgtgaaaggagtaaatttgttagtagcaactcctggtagacttcttgaccacctc
caatttaccaagggattcatatataaaaatttgaagtgccttatgattgatgaagctgac
cgactactggaagcaaattttgaggaggaaatgaagaaaataataaagattctgccaaag
gagaggcaaacagctcttttctctgccacccagacgaaaaaggttgaagatcttgcacgg
ttgtcatttcaaactaccccagtgtatattggtgtggatgatgggaggaaaaaggtcacc
aatgaagggctgcagcaagggtactgtatcatgcctagtgccaagagattcattcttctg
tactcctttttgaagagaaatctgtcaaagaaagtgatggttttcttttcttcctgtaac
tcggtcaaatatcacgcagatcttctgagatacattcaggtagattgccttgatattcat
ggaaagcagaagcagcaaaaacggacatccaccttttttgaattctgcaaggcagaaaag
ggcatcctattatgtaccgatgttgctgctcgtgggcttgacattcctgcagtggactgg
attgtgcagtatgatcctccagatgatcccaaggagtatattcatcgtgtgggtcgaaca
gcacgtggagaaggcggaaggggtcatgcactacttttcctgataccggaagagttgcaa
tttcttcgctatctcaaggctgctaaagtgcctgttaaagaatacgagttcgatgaaaaa
aagctgaagaatgtgaagtcccagctggaaaaactggtggctgaaaactattatttgaac
aaatcagctaaagatgcatataggtcttatatattatcctacaattcacattctctgaag
gacatattcaatgttcatcggctcgaccttcaggcagttgctacatcattcggcttttca
tgtccacccaaggttaacctgaatattgacagcagtgcatccaagttcaggaagaagatt
cgtaaagttgaaggaacccggaatgggtttagtgaaaacaatccttatggaaggaaagtg
gaagatgataaacggcagtttgtcagatattag
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