KEGG   Macadamia integrifolia (macadamia nut): 122078947
Entry
122078947         CDS       T07436                                 
Name
(RefSeq) pre-mRNA-splicing factor SPF27 homolog isoform X1
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
ming  Macadamia integrifolia (macadamia nut)
Pathway
ming03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ming00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122078947
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ming03041]
    122078947
   03400 DNA repair and recombination proteins [BR:ming03400]
    122078947
Spliceosome [BR:ming03041]
 Complex B
  Other components
   Prp19 complex
    122078947
 Complex C
   Prp19-CDC5 complex
    122078947
DNA repair and recombination proteins [BR:ming03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    122078947
SSDB
Motif
Pfam: BCAS2 MobC_2 HMMR_N Arc_MA
Other DBs
NCBI-GeneID: 122078947
NCBI-ProteinID: XP_042501087
LinkDB
Position
5:complement(2118754..2125365)
AA seq 253 aa
MAMNGDILMLEAPPGVWRPSWSVARWEEMVDALAYIDDDYGKPVVKQEVDRLVVEQLRRS
IKKPSDFLKELPPVPKLNFENHPMLAREYERVKSGKPPATLEMSRYGLEPPPVNKRHDAE
AWKPVLGNAYGMLQHQIIRLENLDLMAKHGADVWKLYNQRLEKFLSRMQAIALQYNEGIE
IVNRERKFHQKNTAVELNALSAQWNELCEKNIEMEAACAKIETEIEELKIEATERGWSLE
ANIENGTLRHLEH
NT seq 762 nt   +upstreamnt  +downstreamnt
atggcgatgaatggagacatactaatgctggaagcgccgcctggtgtgtggcggccgagc
tggtcagttgctaggtgggaagagatggtagatgcattggcatatatcgacgacgattac
ggaaaaccagttgttaaacaagaagttgacagattagtggtggagcagttgcggcggagc
attaagaagccctctgatttcctcaaggaacttcctccggtccccaagttgaatttcgag
aatcaccctatgcttgccagagaatatgaacgtgtgaaatcaggcaagcctcctgcaaca
ttggagatgtctcgatatggactagaaccacctcctgtaaataaaaggcatgacgcagag
gcttggaagcctgttcttggaaatgcatatggcatgttacaacaccaaataataagacta
gagaatctggatttgatggcaaagcatggtgctgatgtttggaaactttacaatcaacgg
ctggagaagttcttgtccaggatgcaggcaattgctttgcaatacaatgaaggaattgaa
attgtgaaccgtgaaaggaaatttcatcagaaaaacactgcagttgagcttaatgccttg
tctgcacagtggaacgagctctgtgagaaaaacatagagatggaagctgcatgtgctaag
attgaaactgaaattgaagaactgaaaatagaagctacagaaagaggctggagcttggag
gctaacatagagaatggtactttgaggcacttggaacattga

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