KEGG   Macadamia integrifolia (macadamia nut): 122079076
Entry
122079076         CDS       T07436                                 
Name
(RefSeq) coatomer subunit alpha-1
  KO
K05236  coatomer subunit alpha
Organism
ming  Macadamia integrifolia (macadamia nut)
Brite
KEGG Orthology (KO) [BR:ming00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ming04131]
    122079076
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ming04147]
    122079076
Membrane trafficking [BR:ming04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    122079076
Exosome [BR:ming04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   122079076
  Exosomal proteins of bladder cancer cells
   122079076
SSDB
Motif
Pfam: COPI_C B-prop_COPA_B_2nd Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 WD40_Prp19 Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd WD40_CDC20-Fz WDR55 Beta-prop_WDR36-Utp21_1st Beta-prop_EML_2 WD40_Gbeta EIF3I TPR_COPA_B Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_SCAP ANAPC4_WD40 Beta-prop_DCAF4 Beta-prop_WDR41 WD40_RFWD3 Beta-prop_SPT8 Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_Aladin Beta-prop_RIG_2nd Beta-prop_WDR19_1st Aa-Ago_N Zn_ribbon_19
Other DBs
NCBI-GeneID: 122079076
NCBI-ProteinID: XP_042501253
LinkDB
Position
5:4805674..4810815
AA seq 1218 aa
MLTKFETKSNRVKGLSFHTKRPWILASLHSGVIQLWDYRMGTLIDKFDEHDGPVRGVHFH
KSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHNEYPWIVSSSDDQTIRIW
NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILR
LSQMNTDLFGGVDAVVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQLKLWRMNDTKAWE
VDTLRGHMNNVSCVLFHARQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWIMAAHP
EMNLLAAGHDSGMIVFKLERERPAFSLSGDSLFYVKDRFLRYYEFSTQKDTQVIPIRRPG
STSLNQGPRTMSYSPTENVVLICSDVDGGSYELYVVPKDSVGRGDTVQEARRGVGGSAVF
VARNRFAVLDKSNNQVLVKNLKNEVVKKSALPIAADAIFYAGTGNLLCRADDKVVIFDLQ
QRIVLGDLQTPFVKYVVWSNDMESVALLSKHAIIIASKKLVHRCTLHETIRVKSGAWDDN
GVFLYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSGNTVYCLDRDGKNRAITIDATEYI
FKLSLLRKRYDQVMSMIRSSQLCGQAMIAYLQRKGFPEVALHFVKDERTRFNLALESGNI
QIAVASAKEIDEKDHWYRLGVEALRQGNASIVEYAYQRTKNFERLSFLYLITGNLDKLSK
MLRIAEIKNDVMGQFHNALYLGDIRERVKILESAGHLPLAYVTAAVHGLQDVTERLAAEL
GDNVPTFREGKVPSLLMPPSPVLCGGDWPLLRVMKGIFEGGLDNVGRSAQEEDDETADAD
WGEDLDIVDVDGMQNGDIGIVTEDGEVHEENDEEGGWDLEDLELPPEVNTPQTATSARSM
VFVAPTPGMSVSQIWTQRSSLAGEQAAAGNFDTAMRLLSRQLGMKNFAPLKSLFIDLHTG
SHSYLRAFSSAPVNPLALERGWSESASPNVRSPPALVYDFSQLEEKLKAGYKATTGGKFT
EALRLFLSVLHTIPLIVVESRREVDEVKELIIIAKEYVLGLKMELKRREIKDNPVRQLEL
AAYFTHCNLQMPHLRLALLNAMTVCYKAGNLSTAANFARRLLETNPTVESHAKTARQVLQ
AAERNMKDVSQLNYDFRNPFVVCGATHVPIYRGQKDVSCPYCSSRFVPAQEGQLCTVCDL
AVVGADASGLLCSPSQIR
NT seq 3657 nt   +upstreamnt  +downstreamnt
atgctgacgaaattcgagaccaagagtaatcgggtgaagggcctgagttttcatactaag
aggccatggattcttgcgagtcttcacagtggtgtgatccagctttgggattacaggatg
gggactcttatcgacaaattcgatgagcatgatgggcccgttcgtggtgtccattttcat
aaatctcagccgctgttcgtctccggaggagatgattacaagatcaaagtgtggaattac
aagatgcacagatgtctgtttactcttcttgggcatttggattacattcgtactgttcaa
tttcacaatgagtacccatggattgttagttcaagtgatgatcagactatcagaatatgg
aactggcaatctcgcacttgtatatctgttttaactggccacaaccattacgttatgtgt
gcctccttccatcctaaggaagacctcgttgtctctgcctcattggatcagacagttcgt
gtttgggatattggtgctttgaggaagaagacagtttcccctgcagatgacatcctacga
ctgagtcagatgaacacagatttgtttggtggtgttgatgctgttgtcaagtatgtcttg
gaagggcatgatcggggagtcaattgggcttcgttccatcctaccctgcctttgattgtg
tctggagcagatgatcgccaattgaaactctggcgcatgaatgatacgaaagcttgggaa
gtagacacattgaggggacacatgaataatgtgtcatgtgtgttgtttcatgctaggcag
gacattattgtttccaattcagaggacaaaagtattcgggtgtgggatgtgacaaagcgg
accggtgttcagacattccgaagggagcatgatcggttctggatcatggcggctcatcca
gaaatgaaccttctggcagctggtcatgatagcggtatgatagttttcaagttggagaga
gaaagacctgctttttccttgagtggcgattctctgttctatgttaaagaccgtttcctt
cggtattatgagttttcaactcagaaagacactcaagtgatcccaattcgacgccctggt
tccaccagccttaaccaaggaccaaggacaatgtcgtatagccctacagaaaatgttgtc
ctgatctgctcagatgttgatgggggttcctatgaactttatgttgtacccaaggacagc
gttggcaggggtgataccgtgcaagaggcgaggagaggagttggagggtcagctgttttt
gtcgctcggaacaggtttgctgttcttgacaaaagcaacaaccaagtgttagtgaagaac
cttaaaaatgaggttgtgaagaagagtgcgctacctattgctgctgatgcaatattttat
gctggaacaggcaatttgctgtgcagggcagatgataaagtggtcatctttgatctccaa
cagagaattgttcttggtgatctgcagaccccttttgttaaatatgttgtttggtcaaat
gacatggagagtgttgcattgttgagcaaacatgcaatcatcattgcaagtaagaaactt
gtgcaccgttgcacccttcatgagacaatccgtgtgaaaagtggagcttgggatgacaat
ggtgtcttcctatatacaacactgaaccatatcaagtactgccttcctaacggcgacagt
ggaattatcaggacccttgatgttcctatatacattacaaaggtttctggtaataccgtt
tattgcttggatcgcgatggaaagaatcgtgcaataaccatagatgcaactgagtacata
ttcaagctctcactcttaaggaaaagatatgatcaggttatgagcatgattaggagctca
cagctgtgtgggcaggccatgattgcatacctgcaacggaaaggtttcccagaagttgcc
ctccattttgtgaaagatgagaggacacggtttaatctggcactggagagtggaaatatc
cagattgctgttgcttccgccaaagaaattgatgagaaagatcattggtataggttgggg
gttgaggcacttcgtcagggtaatgccagcatagttgaatatgcttaccagaggacaaag
aattttgagaggctatcttttctgtatcttataacaggaaatttggataagctgtctaaa
atgctgaggattgccgaaatcaagaacgatgtgatgggtcaattccacaatgccctttat
ctgggtgatatcagggagcgtgtcaagatcttggagagtgctggccatttgcctcttgct
tatgttacagctgctgttcatggtctccaggatgttactgagcggcttgctgctgagctg
ggggataatgttcccacttttcgagaggggaaagttccatcccttctgatgcccccttcg
cctgttctttgtggtggagattggccattgttgagagttatgaaaggcatttttgagggg
ggattggacaatgtgggcaggagtgcccaagaagaagatgatgagaccgctgatgctgat
tggggtgaggatttggatattgttgatgtggacggcatgcagaatggagacattggcata
gtgaccgaggatggggaagtacatgaagaaaatgatgaggaaggaggatgggaccttgag
gatctagaactaccacctgaagtaaataccccacaaactgccactagtgctcgttctatg
gtgtttgttgcgccaactcctggcatgtcagtcagtcagatctggacccagagatcatct
cttgctggggaacaagcagctgctggaaactttgatactgccatgcgcttgctaagccgg
caactgggcatgaagaactttgctcctttgaagtctctgtttattgatctacacacaggt
agccatagctacctacgtgctttctcttcagctcctgtgaatccattggcgcttgagaga
ggatggagcgagtcagctagtcccaatgtgaggagccctccagcccttgtgtacgatttc
tctcagttggaagagaagcttaaggcgggttacaaggccacaacaggtgggaagttcact
gaggctttgcggcttttcctaagtgtacttcatacaattcctttgattgtggtcgagtca
aggagggaagttgatgaagttaaggagttaattatcatagcaaaggagtatgtgctggga
ttgaaaatggagctcaagaggagggaaataaaagacaatcctgtaagacagctggagctt
gcagcttacttcacccactgcaacctgcagatgccacacttgagactggcattgttgaat
gccatgacagtttgctacaaggcaggaaaccttagcacagcagctaactttgcaaggcgg
ctgttagagactaaccccactgttgagagccatgcaaagacagcgagacaagtcctccag
gctgcagaaaggaacatgaaggatgtgagccagctcaactatgacttcagaaacccattt
gtggtttgtggggcgactcatgtaccaatctaccgcggtcagaaggatgtctcatgccca
tattgtagttctcggtttgtgcctgctcaggaaggacagctctgtaccgtatgtgatctt
gcagtggttggagcagatgcatctggtttgctttgttccccttcccagataagatga

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