Macadamia integrifolia (macadamia nut): 122079217
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Entry
122079217 CDS
T07436
Name
(RefSeq) E3 ubiquitin-protein ligase RING1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
ming
Macadamia integrifolia (macadamia nut)
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ming04131
]
122079217
04121 Ubiquitin system [BR:
ming04121
]
122079217
Enzymes [BR:
ming01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122079217
Membrane trafficking [BR:
ming04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
122079217
Ubiquitin system [BR:
ming04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122079217
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf-C3HC4_3
Zf_IFT144_1st
zf-HC5HC2H
zf-RING_16
DUF7573
Prok-RING_1
zf-HC5HC2H_2
VPS18_RING_C
Motif
Other DBs
NCBI-GeneID:
122079217
NCBI-ProteinID:
XP_042501418
LinkDB
All DBs
Position
5:10931904..10950491
Genome browser
AA seq
366 aa
AA seq
DB search
MSSAGISGGAAGGATPEPQFYFCHECNHNVSITPSLTSDLVCPDCNGGFIEECENPTPTH
TDNPFFTYSHSFSSGGAPFPSLAAGLAGLPFLLSTPGTMEVPTELSALFDPEIRQRSTTT
MQEPDVFNPFLFLQNYLQSLRAGGANIQFVVENNPSDSGGFRLPSNLGDYFIGPGLEQLI
QQLAENDPNRYGTPPASKSAIEALPNVKISEELLASDSAQCAVCKDTFELGMEARQMPCK
HIYHSDCILPWLELHNSCPVCRYELPTDDPDYEQRTRETRPSGNLTVGSGSTDSGSGRGE
TQENNPPPRMAQRRFSISLPSLFRSFAGQAEASNSGDGSNSGNNESNTGSQGSRDFGSET
RQEDLD
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgccggaatatcgggcggtgcagctggtggtgccacacccgaacctcagttc
tatttctgccatgagtgcaaccataacgtctcgataacgccatctctcacctccgacctc
gtctgcccagactgcaacggtggtttcatcgaagaatgtgaaaaccctacacctacccat
accgataatccttttttcacctactcccacagcttttctagtggcggcgcccccttccct
tctctcgccgccgggctcgccggtcttcccttccttctctccacccccggcaccatggaa
gtccccaccgaactctccgccctcttcgatcctgaaattcgccagcgatcgacgacgacg
atgcaagaaccggacgtcttcaatcccttcctttttctccagaattacctacaatctctg
cgtgcaggtggtgccaacatccaatttgtcgttgaaaacaacccttctgactctggtggc
ttccggcttccttcaaaccttggtgattacttcatcggtcctggcctcgagcagttgatc
cagcagctcgcggagaacgatcctaaccgctatggcacgcctcccgcttcaaaatccgcc
atcgaagcgctcccgaacgtaaagatttcagaggaattgttggcttccgattcggcccag
tgtgcggtttgtaaggacacatttgagctcggcatggaggcaagacagatgccttgtaag
cacatttatcattctgattgtattcttccatggcttgagctgcataattcttgccctgtt
tgtcggtatgagctgccaacggatgatcccgattacgaacaacgtactcgggagacgaga
ccttctgggaatttgactgtgggttctgggtcgacggattctggtagtggcagaggagaa
actcaggagaataaccctccgcccagaatggcgcaacggaggtttagcatttcgttgcca
tcgctatttaggtcatttgctgggcaagcagaggcgagcaacagcggggatggtagtaac
agtggaaacaatgaatcgaatacaggaagtcaggggagtcgagactttgggtctgagacc
cggcaagaggacttggattaa
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