Macadamia integrifolia (macadamia nut): 122079442
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Entry
122079442 CDS
T07436
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 20, chloroplastic isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
122079442
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ming04040
]
122079442
Ion channels [BR:
ming04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
122079442
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
DUF6525
Motif
Other DBs
NCBI-GeneID:
122079442
NCBI-ProteinID:
XP_042501858
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Position
5:8930983..8989435
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AA seq
724 aa
AA seq
DB search
MNSMGSYESEKNLASHSKPLQNDRRISTIQMSGPFFIRSPENFSQPMNGIAGLKSPALLE
GQLRPSNGMEEKDWSNNHFTGNSEHSLNYGPLGVCSNPCCTTCLSSSNFKAEKKQKKSRD
SSLFDLKLHNAFHGDAKGCARMIINILHPFIPAVLKPHARLVQQWNKFFVIACLVAIFID
PLFFFLLTVQQDHNCIVLDLPLTTTLVIFRTVTDLIYFLHMLLQFRIAYVAPESRVVGAG
DFVFHPKKIALHYLRGYFFIDLFIVLPLPQIIVLVILPDYVGSSGANYAKSLLRATLLLQ
YIPKLFRFLPLLAGQSPTGFIFESAWANFVINLLTFILAGHVVGSCWYLLGLQRVNKCLE
EACNNSQQRSCNDFIDCGHGEKIAKFSSDPEWQSWLYNENATACFVTNGTFSYGIYNQAV
SLTTMSSIVTRYVYSLFWGFQQISTLAGNQVPSYFVWEVLFTMGIIGLGLLLFALLIGNM
QNFLQALGKRRLDLQLRRRDVEHWMRHRRLPEELRRKVRASERFNWSVTQGVDEEILMKD
LPEDVQREIRHHLFKFIKKVRIFALIEDPVLDVICERIRQSIYIQGSRILNVGEPVENMI
FIVRGKLESIGEDSTVFPLSEGDVFGEELLTWCLEHSSMNKDGRRISIPAPGQRLLSNRI
VKCLTNVEAFSLRAADLEEVTTRFSRLMRNPRVQRAIRYESPYWRTISAYRIQVAWRYRK
KRLT
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgaactcaatggggtcatacgaaagtgaaaagaatctcgctagtcattccaaacctttg
cagaacgatagaagaatttccaccatacaaatgagtggcccattttttattaggagtcct
gagaattttagtcagcctatgaatgggatagcaggtctgaagtcacctgctctattggaa
ggacaattacgcccctctaatgggatggaagaaaaagactggtcaaacaatcacttcacc
ggcaatagtgaacattcattaaattatgggccattgggtgtatgcagcaatccttgctgc
acaacttgcctatcatcttctaattttaaagcagaaaaaaagcaaaagaaatcaagagat
tcgagcttatttgacctgaagttgcataatgctttccatggagatgctaaaggttgtgcg
cgtatgattattaacattctacatccattcattcctgctgtcttgaagcctcatgctaga
cttgttcaacaatggaataaattttttgttattgcttgcttggtggcgatatttatagat
cctttgttcttcttcctgctcactgttcaacaggatcacaattgtatagttctggacttg
cccttgactacaacgcttgtgatttttaggacagttactgatttaatttattttttacac
atgcttcttcagtttaggatagcttatgttgctccagaatcaagagtggtgggtgccgga
gattttgttttccatccaaagaaaattgctctccattaccttcgtggctattttttcatt
gatctattcatcgtattaccactgcctcagatcattgtattggtgatcttacctgattat
gtcggatcgtcaggagcaaattatgcaaagagtcttttgcgggcaacacttcttcttcaa
tacatacccaaacttttcaggttcctacctttgcttgctggccagtctccaacaggcttc
atatttgaatcagcatgggcaaactttgtcattaatcttctcacatttattttggctggg
catgttgttggctcatgctggtacctcttggggttacagagggtgaataaatgtctagaa
gaggcctgcaataattctcagcagaggtcctgtaacgacttcatagattgtgggcatggg
gaaaaaatagcaaaattttctagcgaccccgaatggcagagttggctgtataatgaaaat
gctactgcttgttttgtcactaatggaactttcagttatggtatttacaaccaagctgtg
tctttgaccacaatgtcaagcatcgtcacaagatatgtctactccctgttttggggtttc
cagcaaatcagtactttggctggaaatcaagttcctagttattttgtatgggaagttctt
tttacaatgggcatcatcggacttgggctcttgctgtttgctttacttattggaaatatg
cagaactttctccaagctctgggaaagaggcgactagatctgcaactaaggcggcgtgat
gttgagcactggatgaggcatcggcgcttgcccgaagaattaagaaggaaagtacgagca
tcagaaaggtttaactggtctgttacacaaggcgtagatgaagaaattctaatgaaagat
ttgccggaggacgtacaaagagaaatccgtcatcatctttttaaatttatcaagaaagtc
cgcatttttgccctaattgaggatccagtattagatgtcatctgtgagagaataaggcaa
agcatatacatacaaggaagcagaattttaaatgttggagaaccagttgagaatatgatc
tttattgtaaggggtaaattggagagcattggagaagattcgactgtatttccattgtca
gaaggggatgtttttggtgaggagctactcacatggtgtcttgagcactcttcaatgaac
aaagatggacgaagaatcagtatcccagcccctggacagagattgctgtccaacaggatt
gttaaatgtttaactaatgtggaagcattctcactccgagctgctgatttagaagaagtc
actacccgtttttcaagacttatgcggaatccacgtgttcaaagagccataaggtacgaa
tcaccctattggagaacaatttcagcataccgtatccaagtagcttggagatacagaaag
aaacgattgacttga
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