Macadamia integrifolia (macadamia nut): 122079872
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Entry
122079872 CDS
T07436
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122079872
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ming03021
]
122079872
03036 Chromosome and associated proteins [BR:
ming03036
]
122079872
Transcription machinery [BR:
ming03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
122079872
Chromosome and associated proteins [BR:
ming03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
122079872
PBAF complex
122079872
GBAF(ncBAF) complex
122079872
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
YEATS
DUF2514
TFIIA
Motif
Other DBs
NCBI-GeneID:
122079872
NCBI-ProteinID:
XP_042502567
LinkDB
All DBs
Position
5:41457417..41461767
Genome browser
AA seq
571 aa
AA seq
DB search
MSTNNNNPTKNVEGAPSPFGNAGMVSSSIPMNHPAQLHSQSQAQAHGGSHFQGQFQSPLQ
SQSQALAQAQVRAFAQVQSQAQAQAQAQAQAHAAQAQAHAAQAQAAHAQFQAQLQAQAQS
LNQTTGIGHLGASSPSLSTPGTANAKRVLQKPPARPPGNATINTISPFKTMELTPAARRK
KRKLPEKQIPDRVAALLPESALYTQLLEFESRVDAALARKKIDIQESLKNPPCIQKTLRI
YVFNTYANQSRTIAEKQNSEMPSWSLKIIGRILEDGVDPDPSGVIQKPSASYAKFSSFFK
RITINLDPSLYPENPTIIWENARSPAPHEGFEVRRKGDKEFTVNIRLEMNYVPEKFKLSP
ALMELLGVEVDTRPRIIGAIWHYVKARKLQNPNDPSFFACDPPLRKVFGEEKMRFSMVSQ
KISQHLSLPQPIHLEHKIRLSGPSPAGNACYDVLVDVPFPLQKEMSAFLANIEKHKEIDA
CDEAICAAIKKIHEHRRRRAFFLGFSQSPVEFINALIASQSRDLKLVAGEASRNAEKERR
SEFYNQPWVEDAVIRYLNRKPAAGSDAPGST
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgtctactaacaataataatccaacgaagaatgttgagggtgctccttccccttttggt
aatgctgggatggtctcgtcatccataccgatgaatcaccctgcgcagcttcactctcag
tcacaggctcaagcacatggaggctcgcacttccagggtcagttccagtctcctctccag
tcccaatcccaagccttggcgcaggctcaagtccgagcttttgcccaagtacagtctcaa
gcccaggcacaggcacaagcacaagctcaagctcatgcagctcaagctcaagctcatgca
gcccaagctcaagcagctcatgcccaatttcaagcccagttacaagctcaagctcagtcc
cttaatcaaaccactggaattgggcatttgggtgcctcatctccatccctttcaacacct
ggcacggcaaatgcgaagcgggtattgcagaaacctccagcgcgtcctcctggtaatgct
accattaatacaatttccccattcaaaactatggagctaacccctgctgctcgtagaaaa
aagcgaaaacttcctgagaagcagatacccgatcgagtggcagcccttctgccagagtct
gctctatacacccagctacttgagtttgagtcgagggtagacgctgctctcgcaagaaag
aagattgatatccaggaatctctgaaaaatcctccgtgtattcagaagactctgcggatt
tatgttttcaacacatatgccaatcagagccgtacaatcgctgagaagcagaactctgag
atgccttcttggtcgcttaagataattgggaggatattggaagacggggttgatccagac
ccttctggtgtgatccagaaaccaagcgcatcgtacgccaagttctcttcatttttcaag
agaattaccatcaacttggacccaagcctctatccggagaatccgaccattatatgggag
aatgctcgatcgccggcaccacatgaaggctttgaggtgagaagaaaaggggacaaggaa
tttactgtgaatatacggttggaaatgaattatgttcctgagaaatttaagctttcacct
gctttgatggaacttctgggcgttgaggtagatacacgcccgagaatcataggtgcaatt
tggcattatgtgaaggctagaaagctgcagaacccgaatgacccttctttctttgcttgt
gacccacctctccgaaaagtttttggggaggagaagatgagattttccatggtttcccag
aagatatctcagcatctttccctccctcagcctattcatcttgagcataaaatcaggcta
tctggtcccagcccagctgggaatgcttgctatgatgtattggtagatgttccctttcca
ttacagaaagagatgtctgctttcttggccaacatagagaagcacaaagagattgatgct
tgtgatgaagctatttgtgctgctattaaaaagatccacgagcatcgtaggaggcgagca
ttctttctcgggtttagtcaatctcctgtggagtttattaatgctttaattgcctcacaa
agcagagacttgaagcttgttgctggggaagctagtcgtaatgctgaaaaggagcgtcgg
tcagaattctacaaccaaccatgggttgaagatgctgttattcgttatctgaaccgaaag
cctgctgcgggaagtgatgctcctggaagcacttga
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