KEGG   Macadamia integrifolia (macadamia nut): 122080343
Entry
122080343         CDS       T07436                                 
Name
(RefSeq) enhancer of mRNA-decapping protein 4-like isoform X1
  KO
K12616  enhancer of mRNA-decapping protein 4
Organism
ming  Macadamia integrifolia (macadamia nut)
Pathway
ming03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ming00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    122080343
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ming03019]
    122080343
Messenger RNA biogenesis [BR:ming03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     122080343
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     122080343
SSDB
Motif
Pfam: EDC4_C Ge1_WD40 WD40_WDHD1_1st WD40 WD40_CDC20-Fz WD40_Prp19 Beta-prop_Vps41 Beta-prop_CAF1B_HIR1 Beta-prop_HPS5 Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_EML_2 Beta-prop_RIG_2nd DUF445
Other DBs
NCBI-GeneID: 122080343
NCBI-ProteinID: XP_042503230
LinkDB
Position
5:complement(8554993..8584561)
AA seq 1408 aa
MASPGNPNQPATFDMQKLFKPSTNPSSPNPGNPNSSPFPPSSYPPPSGPLSYPPQAAPFH
HPHYLPPYAQEQLSGVHPQRTISYATPPLQPPPHLSSPNPNHGARLMALLGTGAPSNMEL
PTPAMPSTSAASSVAIGSEFPLLTNPPVLHSMHSAPPVNMAVSQPTPMKLPSSKLPKGRH
LIGDHVVYDVDVRLQGEVQPQLEVTPITKYVSDPGLVVGRQIAVNRTYICYGLKLGAVRV
LNINTALRSLLRGHTQRVTDMAFFAEEVHLLASASIDGRVFVWKINEGLDEEDKPQITGK
IVIAIQIIGEGDSVHPRVCWHSHKQEILVVGIGNRVLKIDTTKVVKGEVFSAEEPLKCCI
DRLIEGVQLVGKHDGEVTELSICQWMTTRLASASTDGTVKIWEDRKALPLVVLRPYDGRP
VNSVTFLTAPSRPDHINFITAGPLNRELKIWASASEEGWLLPSDAESWQCTQTLELRSSE
EPRVEEAFFNQVVALPRAGLILLANAKKNAIYAIHIEYGHNPISTRLNYIAEFTVTMPIL
SLTGTSDYISEGEHVVQVYCVQTQAIQQYALDLSQCLPPSLENTGLEKMESSASRALDAT
GSDGLATSEPSNMGTTTEMPVGNAALKPTYLVTSSESLPAVRYPGISDSDEVPRLHELAK
SIIESKPSALPPATSDADNIHLTSPTLPLSPRLSGKLSGFRTPSNSFEPGSPLVDCGGDQ
PVHDYSVDRRVDNVLTNLPDIPSLDGSSRKDESKVTQNDITMMPNPPVIFKHPTHLVTPS
EILSMSVTSSENSQVNQGIKRSEAKVQDVVVNKDTESVEVEVKVIGETGSSQNDVFESQK
EPHILIAEKMKKSFCSQASDLSMEMARDCCETFGGEETRQVDDSSVTEVLERSPDAGEEE
VQDSSKDAHGKVSEPTAVTAIPQSPAPAVKGKKQKSKNSQVSGPSSSSPSPFNSMDSSNE
PGSSSGVPSTEAAFAQIIAMQENLNQLMTMQKEMQKQLSVMVAVPITKEGRRLEAALGRC
MEKVIKANNDALWVRLQEENAKHEKLERDRTQQMTSVITNYMNKDLPTMLEKSLKKEMAS
VGPAVARAITPVVEKTLSSVVAETFQRGVGDKAVSQLEKSVHSKLEATVARQIQAQFQTS
GKQALQDALRSSFEASVIPAFEMSCKAMFEQVDAAFQKGMVEHAAAVQQQFESAHSPLAI
ALRDAVNSASSVTQTLTGEIADGQRKLLALAAAGANSKAVNPLVTQISNGPLGGQHEMAM
SVQQVEAPLDPTKELSRLISECKFEEAFTAALQRSDVSIVSWLCSQVDFKGIMSMVPQPL
SQRVLLSLLQQLAYDISTETSRKLSWMTFVAVAIIPTDSMIAMHVRPILEQVYQILAHHV
TLPTVSPNDVPSMHIVMHIINSMLMACK
NT seq 4227 nt   +upstreamnt  +downstreamnt
atggcttcccccgggaatccaaatcaacctgcaaccttcgatatgcagaagcttttcaaa
ccctctacaaacccttcttccccaaaccctggtaatccgaactcgtcaccattcccaccg
tcttcttatcctccgccctctggccctttgtcttacccacctcaggccgctccattccat
catcctcactatctccctccttacgcacaggagcagctttctggggtacatccccaaagg
accatctcctatgccacaccccctctccagccacctcctcacctttcttctcccaatccc
aaccacggagccagactgatggctcttctgggaactggcgctccatctaacatggaatta
ccgactcctgcaatgccgtcgacgtctgcagcgtcttcagtggctattggatcagaattc
cccttgctcaccaatcctcccgtcttgcattcgatgcattcggcgccgccagtcaacatg
gcggtctctcagccgaccccaatgaaattaccgagcagcaagctccccaaggggcgacat
ttgattggcgatcacgtagtttatgatgtcgacgttaggttgcagggtgaggtccagccc
caactcgaggtaaccccaatcaccaagtatgtctcggatccgggacttgtcgtcgggcgt
caaatagcagtaaacaggacctatatttgctatggactgaagctgggggctgtccgggtt
cttaatataaacactgccttgagatctttgcttcgaggtcacactcagagggtcacagac
atggctttctttgctgaggaagttcaccttttagccagtgcaagcatagatgggagggtt
tttgtatggaagattaatgaaggtctagatgaagaagataagccacaaattacaggaaaa
attgttattgccattcagataattggagagggggattcagtacatccacgagtctgttgg
cactctcacaaacaagagattctggtagtaggtattggaaatcgtgtgctgaaaattgac
acaacaaaggttgtaaaaggtgaagttttttcagcggaagagcctctcaagtgttgtata
gatagactgattgagggtgtccagcttgttggtaaacatgatggggaagtgactgagttg
tcaatatgccagtggatgaccacccgcttagcttctgcatcaacagatggcacggttaag
atatgggaagaccgtaaggcactgccccttgtggtattgaggccatatgacggtcggcct
gttaactcggttacattcctaactgcacctagccgccctgatcacattaattttatcaca
gctgggccacttaatcgtgaattgaagatatgggcctcagcaagcgaagaaggttggctg
ttacctagtgatgctgaatcatggcagtgtactcagacattggagttgaggagttctgag
gaaccccgagttgaggaggcgttctttaatcaagttgtagccttgccacgtgcaggcctc
attcttcttgcaaatgccaagaaaaatgctatatatgccatacacatagaatatggtcac
aacccgatctcgactcgcctgaattatattgcagagtttactgtcacaatgcctattttg
agtcttactggtacaagcgactacatatctgaaggggagcatgtggttcaggtttactgt
gtccagacacaggccattcaacagtatgcactggatctttctcagtgcttgcctccatca
ctggagaatacgggattagaaaaaatggagtccagtgcatctcgtgctctagatgcaact
ggttcagatggattggctacttcagagccatctaatatgggtacaactactgagatgcct
gtaggaaatgctgcactcaaaccaacttacttagtgaccagttccgagagtttacctgct
gtgaggtatcctggaatctcagattctgatgaggttcctcgcttacatgaattggcgaaa
tcaattattgaatctaaaccaagtgctttgccaccagcaacttctgatgctgataatatc
catcttacatcaccaactcttcccttgagtccaaggctgtcaggaaaactatctggtttt
agaactccgtcaaatagctttgagccaggttccccactagttgattgtggcggggaccag
ccagttcatgattattcggttgataggagagtagacaatgttcttacaaacttaccggat
attccctccttggatggaagctctaggaaggatgaaagcaaagttacccagaatgacatc
actatgatgcctaatcctcctgtgatattcaaacatccaacccatttggtaactccttct
gagatattatcaatgtctgttacttcctctgaaaatagtcaggtcaatcaaggtataaaa
aggagtgaggcaaaggtacaagatgtggttgtcaacaaagatacagagagtgttgaggta
gaggttaaagttattggtgagactgggtcaagtcagaatgatgtgtttgaatcccagaaa
gaaccacacattcttattgcagagaaaatgaagaaatccttttgctcccaggcttcagat
cttagcatggagatggccagagactgctgcgaaacttttggtggagaggagactcggcaa
gtcgatgattctagtgtaactgaagtgctagagcggtctccggatgctggtgaggaagaa
gtgcaagattcctcaaaagatgcacatggaaaggtttcggagcccactgcagttacagca
attccacagtctccagcaccagctgtgaaagggaaaaaacagaaaagtaaaaactctcaa
gtgtcaggtccatcttcctcttctccaagccctttcaattccatggattcttccaatgaa
ccgggtagcagttctggtgtcccttctacagaggctgcttttgcacaaatcattgccatg
caagaaaatctgaaccagctaatgaccatgcaaaaagaaatgcagaagcagttgtctgtg
atggtggctgtcccaatcaccaaagaaggcagaagacttgaggcagctctaggcaggtgc
atggaaaaagttattaaggccaacaatgatgctttgtgggttcggcttcaagaagagaat
gcaaagcatgagaaattagaacgtgaccgtacacagcagatgactagtgttatcacaaac
tatatgaacaaggacttgccgaccatgctggagaaatcattgaagaaggaaatggcttct
gtaggaccggctgtagctcgtgctattactccagttgtggagaaaacactttcttcagtt
gttgcagagacattccagagaggggttggagacaaggctgtgagtcagttggaaaaatca
gttcattcaaaacttgaagctacagttgctaggcaaatccaagctcaatttcaaacttct
ggaaagcaagctcttcaggatgcattaagatctagcttcgaagcttcagtaattccagca
tttgagatgtcatgcaaagccatgtttgagcaagttgatgctgcatttcagaaagggatg
gttgaacatgccgctgcagttcagcagcagtttgagtctgcacattctccattggctatt
gctttgagggatgcggtcaattcagcatcatctgttactcaaaccttgactggagagatt
gctgatggccagcgtaagcttttagctcttgcagctgcgggagcaaactcaaaggcagta
aatcctttggttacgcaaataagcaatggtcctttaggtggtcaacatgagatggccatg
tctgtgcaacaggttgaggcacctttggatcctaccaaagagctgtcaagattgatatct
gaatgcaaatttgaggaagcattcactgcagctttgcaaagaagtgatgtttctattgta
tcatggctatgttctcaggttgattttaaaggcatcatgtcaatggtgcctcagcctctg
agtcaaagagttctgctttcccttctccagcagttggcctacgatatcagcacagaaaca
tcgcgaaaactgtcatggatgacattcgtggctgttgccattatcccaacagactcgatg
atagcaatgcatgtgaggcccattttggagcaggtttatcaaatactggcccatcatgtc
accttaccgactgtgagtccaaatgatgtcccaagcatgcacattgtcatgcatatcatc
aactccatgttgatggcctgtaaatga

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