Macadamia integrifolia (macadamia nut): 122081447
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Entry
122081447 CDS
T07436
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 20, chloroplastic isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
122081447
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ming04040
]
122081447
Ion channels [BR:
ming04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
122081447
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Gene cluster
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Motif
Pfam:
Ion_trans
cNMP_binding
Meth_synt_2
Motif
Other DBs
NCBI-GeneID:
122081447
NCBI-ProteinID:
XP_042504530
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Position
1:21547826..21807109
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AA seq
745 aa
AA seq
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MDGGKKGERLIRDANAQSVDIEFQRLKGMKRSASMPEQMNSMESYESEKNLVSRTGPLQS
NRRTSSIQMSGPLFIRRSPGNFSQPLQGIAGQKSPSLMEDQLPPSKGMEEQGWSNNDFNR
NNGHLLHSRDSVLFDAKFPEVLYGEVCVRKSFNFLHRFIPGVMSPHAKLVRQWSYFVHIA
CFVSIFLDPLFFFLLTVQEDNKCIVLNSPLTTTLVVFRTVTDFIYFMHMLIQFRLAYVAP
ESRVVGAGDFVIHPKKVALNYLCGYFSIDLFVVLPLPQIMILVVLRKYVGSSAANYGRNL
LQAAFLLQYMPRLYRFLPLIAGLFPTGFTFASAWGNLVLNLIMFILAGHVVGSCWYLFGL
QRVNKCLQDACIDSQQKACIEFIDCGHGEKIAKFKSKPEWLSWVNNENATACFDTSSNGS
FSYGIYYQAVSLSTKPSIIVRYVYSLFWGFLQISTLAGNQVPSYFVWEVLFTMAITGLGI
MLFAILIGNIQNFLQSLGKRRIDNHLRICDVEQWMSAWHLPLHIRRKVRASERWKWSVTQ
DINGEKLMEDLPDDLQKEIRRHHFKFIKKVRIFSLIEDPILDSIRERLRQNIYIRGSRIL
NLGEPIEKMVFIVKGEMESIGEDCSRVPLSEGDICGEELLTWWLQRYSVNKGWRRMSITG
QQLLSNRTVRCLTNVQAFSLQAADLEEVTTRFARFLQNRRVQGAIRYESPYWRSCAAILI
QVAWRCRRKRLNQVNTSNQEIQEMK
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atggatggtggtaagaaaggtgaaaggctcataagagatgctaatgctcaaagtgtagat
attgaatttcagaggcttaaaggcatgaaacgaagtgcatccatgcccgagcaaatgaac
tcaatggagtcatatgaaagtgaaaagaaccttgtaagtcgtaccggtcctttgcagagc
aataggagaacttcctccatacaaatgagtggcccactatttattaggaggagccctggg
aattttagtcagcctttgcaggggatagcgggccagaagtcaccttcattaatggaagat
caattacccccttctaaagggatggaagaacaaggctggtcaaacaatgacttcaacaga
aataatggacatttactacattcaagagattcagttttatttgatgccaagtttcctgaa
gttctgtacggggaagtttgtgtgaggaagagtttcaactttctacatcgattcattcct
ggtgtcatgtctcctcatgctaaacttgttcgacagtggagttactttgttcacattgca
tgctttgtatcaatttttttagatcctttgttcttcttcctgcttactgttcaagaggat
aataagtgcatagttcttaactcgcccttgacaacaacacttgtggtttttagaacagtt
actgatttcatttatttcatgcacatgcttattcagtttaggttggcttatgttgctccc
gagtcgagagttgtgggtgctggagattttgttatccatccaaagaaagttgctctcaat
tacctttgtggttatttttccattgatctattcgtggtattaccgctacctcagatcatg
atattggtcgtcttaagaaaatatgttggatcatcagctgcaaattatggaaggaatctt
ttgcaggcggcctttcttcttcagtatatgcccagactttacaggttcctgcctttgatt
gctggtctgtttccaacaggcttcacatttgcatcagcatgggggaaccttgttcttaat
cttatcatgtttattttggctgggcatgttgttggctcatgctggtacctctttggtttg
cagagggtgaacaaatgccttcaagatgcctgcattgattctcagcagaaggcctgcatc
gaattcattgattgtggacatggggagaaaattgcaaaatttaagagcaaacctgaatgg
cttagttgggtgaacaatgaaaatgcaactgcctgttttgacactagtagtaatggttct
ttcagttatgggatttactaccaagctgtttctctatcaacaaaaccaagcattatcgtg
agatatgtgtactctttgttttggggtttcctgcaaatcagtactttggctggaaatcaa
gttcctagttattttgtatgggaagttcttttcacaatggccatcaccggacttgggatc
atgctctttgctatactcattggaaatatacaaaactttctccaatctttgggaaagagg
cgaatagataatcacctacggatttgtgatgttgagcaatggatgagtgcttggcacttg
cccttacatataagaaggaaagtaagagcatcagaaaggtggaagtggtctgttacacaa
gacataaatggagaaaagttaatggaagatttgccggacgacctccaaaaagaaatccgt
cgtcatcattttaaatttattaagaaagtccgtattttttccctaattgaggatccaatc
ttagattccatccgtgagagattgaggcaaaacatttacatacgaggaagcagaatttta
aaccttggagaaccaattgagaagatggtctttattgtaaagggtgaaatggagagcatt
ggagaagattgtagtagagttccattgtcagaaggggatatttgtggtgaagagctactc
acatggtggcttcagcgctattcagtgaacaaaggttggcgaagaatgagtataacggga
cagcaattgctatccaacaggacagtaagatgtttaactaatgtgcaagcattctcactc
caggctgctgatttagaagaagtcaccactcgttttgcaagatttttgcagaaccgacgt
gttcaaggagccataaggtacgaatcaccctattggagatcatgcgcagcaatccttatc
caagtagcttggagatgcagaagaaaacgattaaatcaagtcaatacctctaatcaggag
attcaggaaatgaaataa
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