KEGG   Macadamia integrifolia (macadamia nut): 122081473
Entry
122081473         CDS       T07436                                 
Name
(RefSeq) protein ROOT INITIATION DEFECTIVE 3-like isoform X1
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
ming  Macadamia integrifolia (macadamia nut)
Brite
KEGG Orthology (KO) [BR:ming00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ming03009]
    122081473
Ribosome biogenesis [BR:ming03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    122081473
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_EML WDR55 Beta-prop_TEP1_2nd NBCH_WD40 EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd WDR90_beta-prop_4th Beta-prop_DCAF4 Beta-prop_IFT140_1st ANAPC4_WD40 Beta-prop_HPS5 Beta-prop_IP5PC_F WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st Beta-prop_VPS8 Beta-prop_RIG_2nd Beta-prop_Vps41 Beta-prop_SPT8 Beta-prop_WDR75_1st WDR54 Beta-prop_WDR75_2nd Beta-prop_SCAP Beta-prop_Nup120_160 Beta-prop_LRRK2 Ge1_WD40 Beta-prop_WDR19_1st Beta-prop_BBS7 PEP5_VPS11_N Beta-prop_DCAF12
Other DBs
NCBI-GeneID: 122081473
NCBI-ProteinID: XP_042504554
LinkDB
Position
6:27569495..27579279
AA seq 320 aa
MEVVIASSPVDAGISCWDLNSGTEHLRHRTCASAPHGLTCVGRRFLASSQLRDSSLSSGS
ILYWSWNKPQVEVKSFPAEPINPLVSNSEGTYLIGGGSSGDIYFWEVSSGTLLKRWHAHY
RAVTCLVLSEDESLLISGAEDGCVRVWSLLMMFDDIGMEAAKHQYEHGFSEHTLRVTDVI
SGHGGCNAVIVSASEDRTCKVWSLSKGKLLRTVEFPSIIDAIALDPGEHVFYAGSRDGKI
FAGALNAESPSSSCYGKHITGSLSDHSKAVTCLAFSSNGTLLVSGSEDGLLRVWDTKTHN
IVRIFRHTKGTIVLKYCFVA
NT seq 963 nt   +upstreamnt  +downstreamnt
atggaagtagtaatcgcctcgtcacccgtcgatgctggtatcagttgctgggacttgaat
tccggcacagagcatctccgtcatcgaacatgcgcctctgctcctcatggcctcacttgt
gtggggcgtcgctttcttgcatcttcgcagcttcgagactcttctttatcatctggctcc
attctctactggtcctggaacaagcctcaggttgaagttaaaagctttcctgctgagcca
attaatccacttgtttctaatagtgaaggcacatatctgattgggggaggatcatctggt
gacatttatttttgggaggtttctagtggcacactacttaagaggtggcatgctcattac
agagctgttacttgcttagtactatcggaagatgaatcactgttaatttctggggcagag
gatggatgtgtcagagtctggtcccttctcatgatgtttgatgatattgggatggaagca
gcaaaacatcaatatgaacatggtttctctgaacacactttgcgtgtgacagatgttatt
tcaggtcatggagggtgcaatgcagttattgtgtctgcttctgaggatcgaacgtgtaag
gtttggagcctatccaagggaaagttgttgagaactgttgagttcccctctataattgat
gcaattgcactggatcccggtgaacatgtattttatgctggcagtagagatgggaagata
tttgctggtgcacttaatgctgaaagcccatctagcagctgttatgggaagcatattact
ggttcactgtctgatcacagtaaggcagtgacttgcttggcattcagttcaaatggaact
ttattagtatcaggatcagaggatggtttgcttcgagtttgggacactaaaacccataac
attgttcgtatctttagacatacaaaaggtaccatcgttctgaaatactgctttgttgcc
taa

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