Macadamia integrifolia (macadamia nut): 122082005
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Entry
122082005 CDS
T07436
Name
(RefSeq) serine/arginine-rich splicing factor RS40-like isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122082005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ming03041
]
122082005
Spliceosome [BR:
ming03041
]
Common components
Common spliceosomal components
SR proteins
122082005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_5
RNA_bind
DbpA
RRM_Nup35
DUF2129
Motif
Other DBs
NCBI-GeneID:
122082005
NCBI-ProteinID:
XP_042505409
LinkDB
All DBs
Position
6:31979277..31983768
Genome browser
AA seq
307 aa
AA seq
DB search
MKPIFCGNFEYEARQSDLERLFGRYGKVDRVDMKSGFAFVYMDDERDAEDAVRALDRTEF
GRQGRRLRVEWTKQERSIRRPPGGSRRSAANLRPTKTLFVINFDPVHTRTRDLEKHFDPY
GKILNIRIRRNFAFIQYETQEDATKALDATNTSKLRDRVISVEYAARDDVEKRNGYSPDR
RRDRSPERRSRDRGRSPSPYRRERGSPDYGRGPSPYARPERRDRSPERSRDRSPERGRDR
SPERRSRDHEQSPSPYRRERGSPDYGRGPSPYYRPEPRASPDLGTTESPLYERDVSRSPP
ARERSQS
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgaagcccatattttgtggaaactttgagtatgaagcacggcagtctgaccttgagcga
ctttttggcagatatggaaaggttgacagggtggatatgaagtctggctttgcgtttgtc
tatatggatgatgagcgagatgctgaggatgcagttcgagcactcgaccggacagaattt
ggtaggcaggggcgccggcttcgtgttgaatggacaaagcaagaacgtagtatcagaagg
cctccagggggttcaagaagatctgcagctaatttgagacccactaagactttgtttgtt
attaattttgaccctgttcatactcggacaagggacttggagaagcactttgatccatat
ggaaaaatactgaatataaggatcagaaggaattttgctttcattcagtatgaaacacaa
gaagatgccactaaagcactggatgcaacaaacacgagcaagttgagggatcgagttatt
tctgtggaatatgctgcccgagatgatgttgaaaaaagaaatgggtacagccctgataga
cgccgtgataggtcacctgagaggaggagccgtgatcgtgggcgttcaccgagcccttac
cgaagagagagaggtagtcctgattatggccgtggacccagcccatatgctaggcctgaa
cgtcgtgacaggtcacctgagaggagtcgtgataggtcacctgagaggggtcgtgacagg
tcacctgagaggaggagccgtgatcatgaacaatcgccgagcccttaccgaagagagaga
ggtagtcctgattatggccgtggacccagcccatattataggcctgaaccaagggcgagt
cctgatcttggtacaactgaaagccctctctatgaaagagatgtcagccgatcaccccca
gcacgcgaaagatctcaatcttga
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integrated database retrieval system
