Macadamia integrifolia (macadamia nut): 122082123
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Entry
122082123 CDS
T07436
Name
(RefSeq) pentatricopeptide repeat-containing protein At2g15820, chloroplastic-like isoform X1
KO
K27936
pentatricopeptide repeat-containing protein, chloroplastic
Organism
ming
Macadamia integrifolia (macadamia nut)
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ming03041
]
122082123
Spliceosome [BR:
ming03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
122082123
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Gene cluster
GFIT
Motif
Pfam:
LAGLIDADG_2
PPR_2
PPR
PPR_long
PPR_3
PPR_1
ARM_TT21_N
AEP1
Suf
DUF1955
Motif
Other DBs
NCBI-GeneID:
122082123
NCBI-ProteinID:
XP_042505544
LinkDB
All DBs
Position
1:25041441..25046259
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AA seq
848 aa
AA seq
DB search
MLLHSGAQDLSSSTFTIATTSTSTFFLNPNQNPTTTLRPSMRTAVSSSIRAFRSIAFSPS
FRNLFYDYSPKIISPFNGNRNRNRRLSVFQPSPAASASASTALSQQLLSEDERVGVEEIW
DLGTESEREVFDFDAVSMDNDLKHLKLPSLEVKELEELPEQWRRSRLAWLCKELPSHKPG
TLIRILNGQRKWMTQEDATYVAVHCMRIRENEASFRVYKWMIQQHRFRFDFTLASRLADF
MGKERKFSKCREIFDDIINQGNVPSESTFHILTVAYLSAPVQGCLEEACGIYNRMIQFGG
YQPRLSLHNSLFKALISKPGGESKCYLKQAEFIFHNLVSSGLEIHKEIYAGLIWLHSYQD
TIDRERITELRKEMQEAGIKEGIEVLLSQLRACSKEGDMEEAERTWLKLLKSECSLPSQA
FVYRMEVYSKVGEPMKSLEIFRGMQEHLGSTSVVAYHKIIEVMCKAHEMEDAETLMDEFQ
NSGLKPLMPSFIALMGMYFDLSLHNKLESTFTQCVENYNPNRTIYNIYLDSLVKIANIDK
AEEIFNQMLSDGMIGVNTRSCNAILGLYLSSGEHVKAEKIYDFMCQKKYDIESPLMDKID
YILSLKRKVVKKKPTSLKLSKEQREILVGLLLGGLQIESDEERRNHALHFDFSENSDVHC
VLKRHLFDLYHEWLRFCGRSNDESDDIPNQFSTIPHSYFGFYADQFWLKGRPVIPKLIHR
WLSPSVLAYWYMYGGLRSSSGDIVLKLKGGSQEGVERIVKTLKAKSLDCRVKRKGKVFWI
GFLGSNSVWFWKLTEPYILDGLKDLLKPDGHFLEGEMAEDQSISFDTESDSDEGASDYDS
KNDLQDSH
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgcttctacatagcggagctcaagacttatcatcttctacttttaccattgccaccacc
tccacctccaccttcttcttaaaccctaaccaaaaccccaccactactctccgtccttcc
atgcgcacagccgtctcctcttccattagggcttttcgctctatcgccttctccccctct
ttccgaaacctcttctacgattactctcccaaaattatttcacccttcaacggaaaccgc
aaccgcaaccgccgattatctgtctttcaaccctctccagctgcttccgcttctgcttcg
actgcattgtcgcagcagttactgagtgaagatgagagggtcggagtggaagagatttgg
gatttgggtactgagagtgaaagagaggtgtttgatttcgatgctgtgtcgatggacaat
gatttgaagcatctgaagttgccttctttggaagtgaaggagctggaagagcttccggag
cagtggaggagatcgaggttggcgtggttgtgtaaggaattgccgtcgcataagccaggg
actttgattcgaatacttaatgggcagcggaagtggatgactcaggaagatgctacttat
gttgctgttcattgtatgaggattcgtgagaatgaggccagcttcagggtgtacaaatgg
atgatccaacagcatcggtttcgatttgattttacactagctagtagactagcagatttt
atgggaaaagagagaaaattttctaagtgtcgggagatatttgatgacataatcaatcag
ggtaatgtgcctagtgaatctacattccatattttgactgttgcatatctcagtgcacct
gttcaaggttgtctggaggaagcatgcggcatttacaaccgcatgattcagtttggaggc
taccaaccccgcctcagtttacacaattctctttttaaagctctcattagtaaacctgga
ggtgaatcaaaatgttatttaaagcaggcagagttcatatttcataacttggtatcatct
ggactagagatacacaaggagatttatgctggcctgatatggcttcacagttatcaggat
actatagatagagaaaggataacagaactgaggaaggagatgcaagaggcaggaatcaaa
gagggaatagaggttcttctgtcccaactgagagcttgctccaaagaaggggacatggag
gaagcagaaagaacttggcttaagctcctgaagtctgaatgtagtctcccttctcaagct
tttgtttatcgaatggaagtctattcaaaagttggagaacccatgaaatcgttggagata
tttagaggaatgcaggagcatttggggtctaccagtgttgtggcatatcataagatcata
gaggtgatgtgtaaagcgcatgaaatggaagatgcagaaaccctaatggatgagttccaa
aacagtggtctaaagccccttatgccatcttttattgctctaatgggtatgtattttgat
ttgagcttgcacaacaaattggagtcaactttcacccagtgcgttgagaattacaatccc
aatcgaactatttacaatatatacttggattcattggtaaaaattgctaatattgacaag
gcggaggagatcttcaaccaaatgctcagtgatgggatgattggtgtgaacactaggtca
tgcaatgccatcttagggttgtatctctcttctggagagcatgtgaaggcagaaaaaatt
tatgacttcatgtgccagaagaaatatgacattgaatctccactaatggataaaattgat
tatattctgagcttaaagagaaaggtggttaagaagaagcccacaagtctaaaactcagc
aaagaacaaagggagatcttggttggcttgctcctgggtggtttgcagatagaatcggat
gaagaaaggaggaatcatgcactccattttgatttcagtgaaaactctgatgtgcattgt
gttctaaaaagacatttattcgatctgtaccatgagtggttacgtttctgtggtaggtca
aatgatgagagtgatgacataccaaatcaattctccacaattccacattcttattttggc
ttttatgcagatcagttctggctcaaaggccggccggtaattccaaagcttattcatcgt
tggctttcacccagtgttctagcatactggtatatgtatggaggcctcagatcatcctca
ggggatattgtgctgaaactaaagggtggtagtcaggaaggtgttgaaagaattgtcaag
acattaaaagcaaaatcattggactgcagggttaagaggaaggggaaagtgttttggatt
ggtttcctaggaagtaattctgtctggttctggaaacttacagaaccttacattctggat
ggcttaaaagatcttctaaaaccagatggtcactttttggaaggtgaaatggctgaagac
caaagcatcagctttgatacagagtctgattcagatgaaggagcttctgactacgacagt
aagaatgatcttcaggacagccattag
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