Macadamia integrifolia (macadamia nut): 122082308
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Entry
122082308 CDS
T07436
Name
(RefSeq) protein SHORTAGE IN CHIASMATA 1
KO
K28108
shortage in chiasmata 1
Organism
ming
Macadamia integrifolia (macadamia nut)
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ming03036
]
122082308
Chromosome and associated proteins [BR:
ming03036
]
Eukaryotic type
Meiosis-specific proteins
Others
122082308
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5962
HBD
Motif
Other DBs
NCBI-GeneID:
122082308
NCBI-ProteinID:
XP_042505703
LinkDB
All DBs
Position
6:complement(33441010..33457174)
Genome browser
AA seq
1625 aa
AA seq
DB search
MRTRFLCVDYFKRPSIEGLDNLSFFRLPLPHFPPSNICDGEEIFCFNSISSDFSEIERLP
VENALSRFLSDVLPHTIDIDNGQIPVTRIQSACADGLKSDENRRNFTSTASELQFEEEEA
DYEYDKEESLLACRSGNVEIKILTEENEFTDEEENNRFKVIRLETPELDCFLEEHAHYSQ
KVDGQIFSQISEIGNYLDMVDFKAGTAIYYPCEVSKSVYSVDDIHSEFPLEQRSSCFVED
AGFALDCCSKFPLLEVNEVSSELYMSPSMGELHLILENIKDQNWTQNFDLVADSKDLLGS
IDINILECLSGHSPSEPCGEPESTCLDLALEMEFISIQDAADLKVTSLMHLQMSSCDFFS
VLRPIHLEEVEILDLDSFQSSEVFANSYIANGARICDQMLKDNMDSVWNFYESIISNELA
LVDDTFKPLLIPVISDVQDIQLLSALEEILAVVKPLPPSASDGIYLDWHLLERETWNLEE
IDTYNIDAELEYLNSGMVGIDFVFWEEASDVPSVSESKEILVEVTAVNLGVNEPLTGATH
SQLSKDSRKLGKGEVVPQTSTDKVTMLFESMSQFNDLDFFLNPKKATARRNSEPAVAEKT
DGNAKLPLASSSNPTICASVEEKPQQWDIEVHQIMLSDHILSLVDSFQKSYLATLENEVA
LKEKFLPFPVVDNFNLLSIKKQNLVDWIKNISAKQTTLACGDETVVALVTLYAIKQMACY
LCFHGIHTTHLYVDNLSRSYKYLRCRLILLQSLIYEAYQKADTVITESHPTLSVIQGILR
LKTSQSGSKVLIVADQLFWLPLKRLLTVMGILFHEVQDVHMHADQPDAWDSSEFTKIIME
AMLHSDCLLISRKNVSASLPFNQFSMILEYGGSQSSSKIFSFSPKLSGLPRLHFLKVELE
DFSAPKALCEGFYASHNDFALEEISQSISTLYECIKEHKFKEQINSEPVYEKCVERSDAA
DYVEDCSKSASVPSAPFAMESKQINSVSPYPDVVIIVNTQNFDKEMLMYRRSSYQKILAM
EKQGVQVVEREINLPVDLILSAAVCLVLYDCRNVGKKATVTDEASSCITLYVEHIATDVL
TSLSFSFSSCILIFEGESSFLAGIMDSSDALYAAAASLGLDLQLFCSYSSELTDDIIMSC
IIYATKLNKGLYPKMFESETLAESFLTSFPSINPLSAHAILTTGGKLVEFLEWSHDCRIQ
AIWKYHVPDESLALFSALCRYGEREESKSGMTQCSSSVSSVPDSGNSHCKTECDRKRRKY
MIDAHKFQMPMEELLFDAPHQSTDGILKPSRVSQPYHSHVSSIGPEIFDRVGGASLSVSD
QWSEQKEDLNISIMNDLDWNGNDFENLHRDFKGEVIDLNYSSLLGEDFSNANATNFSTRV
QDIRCNPTPTNSTVSRTSLFGTKDLTCLPASLEINFGSDICSLQKDQNQKLKGSICAQLD
LELDKDTLPMKCQKELLKGRKAKGSTEDGGGLLFPYAETPLSHIIHSSEPQQRSPWTMEF
LNRIKEKSKMHQQSLPCDATISCFGCHGNVQKVAKKSPSVLDGFRYQGGTYPKKIMKQKQ
QKRLVQPSSSKNVKASASFLPICTPTDKRARQTLSFVRNGNGTQSKLVWADGNVHCLRKR
LRNEL
NT seq
4878 nt
NT seq
+upstream
nt +downstream
nt
atgcgtactcgtttcctatgcgtcgattacttcaaacgcccttcgatcgaaggtctggat
aacctgagctttttccgtctaccattacctcatttcccgccttcgaacatctgcgacgga
gaagaaattttctgtttcaattcgatttcgagtgatttttcagaaatcgagaggcttccg
gtggagaatgctctttctcgattcttatccgatgttcttcctcataccattgacattgat
aatggacaaattcctgttactcggattcaaagtgcttgcgctgatggactgaagagtgat
gaaaaccggagaaatttcacatcgacagcttctgagcttcaatttgaggaggaagaagct
gattacgaatacgacaaagaagagagtctgctagcttgtagatctggaaatgtagagatc
aaaatactgacggaagaaaatgagttcacggatgaagaggaaaataacaggtttaaagta
atccgacttgagacaccggaactggattgcttcttggaggagcatgcacactattctcaa
aaagtggatggtcaaatcttctcccaaatttcggagattggaaattatctggatatggtt
gacttcaaagctggaactgcaatttattatccttgtgaggtttcaaaatcagtttattca
gttgatgatattcattcagagtttcctttggagcaaaggagttcttgttttgtggaagat
gctggttttgctctggactgttgtagcaaatttcctctcttggaagtgaatgaggtcagc
tcggagttatacatgagcccatccatgggagaacttcatttaatacttgagaatattaaa
gaccagaactggacgcaaaattttgacctagtggctgacagcaaggaccttttgggatct
attgacataaatattttagagtgtctgtcaggacattctccatcggagccatgtggtgaa
cctgaatcgacatgtcttgacttggccctagaaatggaatttattagcatacaagatgct
gcagatcttaaagtcacttcactgatgcatctacagatgtcaagttgtgattttttctcc
gtgttaaggccaattcatttggaggaggttgagatccttgatttggactcttttcaatct
tctgaagtctttgccaattcatacatagccaatggagccagaatatgtgaccagatgctc
aaagacaacatggactctgtttggaatttttatgaatcaatcattagcaatgaactagca
ctggtggatgatacattcaaaccattgctgatacctgtgatatctgatgtgcaagatata
cagctgctatcagcccttgaagaaattctagctgttgtgaaaccacttcctccatctgcc
tcagatgggatatatttagattggcatcttttggagagagaaacatggaacttggaggag
attgacacctacaacattgatgctgagctggaatatttaaatagtggaatggtgggaatt
gattttgttttctgggaggaagcttcagatgtacccagtgtttcagaaagcaaggaaata
ttggttgaggttactgctgtgaacttaggggtcaacgagcctcttactggtgctactcac
agtcagttgtcaaaagatagtcgaaagctgggaaaaggagaagttgttcctcagactagc
actgataaggttacaatgttgtttgaatctatgtcacaattcaatgatcttgattttttc
ctaaatcccaagaaggcaactgcaaggagaaatagtgaacctgcagtcgcagagaaaact
gatggtaatgccaaacttcctcttgcttcatccagcaatccaacaatatgtgcttcagtt
gaagagaaaccgcagcagtgggatattgaggtccaccaaattatgctgtctgatcatatt
ttgagccttgttgacagctttcaaaagagctacctagcaaccttggaaaatgaagttgct
cttaaagagaaatttttgccattcccagttgtggataatttcaacttgcttagcataaaa
aaacaaaatctggtggattggattaagaatataagtgcaaaacaaacaacactggcttgt
ggagacgaaacagttgtggcacttgtcacattatatgcaatcaaacagatggcctgttac
ctgtgttttcatggaatccatacaactcacttgtatgtagacaacttatctagaagttac
aaatacttgagatgcagattaatcttactccaatccttgatttatgaagcttaccagaag
gctgataccgtaataacagaatcacacccaaccctgtctgttatccagggcatattgcgg
ttgaaaacttcacaaagtggttcgaaagtattgatagttgctgaccaactattttggttg
ccattgaagagactgttgactgtcatggggatattatttcatgaagtacaggatgttcat
atgcatgctgatcaaccggatgcctgggacagtagcgagttcacaaagattataatggag
gccatgctgcactcagattgcttattaatatcccgcaagaatgtttctgcatcacttcca
ttcaaccagttcagcatgattttggaatatggaggttcacaaagctcatcgaaaatattt
tctttttccccaaagttatctggtctgcctcgtcttcacttcttgaaggtggaattggag
gattttagtgctcccaaagcactctgcgagggtttctatgcatcccataatgattttgcg
ctggaggagatctctcaatcaatctcaacactatatgagtgcatcaaggagcataagttt
aaagaacagataaactctgaacctgtttatgagaaatgtgtggaacgctcagatgcagct
gattatgtagaagattgcagcaagtctgcatcagttcctagtgctccatttgcaatggag
tccaagcagataaactcagtctcaccgtatcctgatgtagttattattgtgaacactcaa
aattttgataaggaaatgcttatgtaccggagaagctcttaccaaaagattcttgcaatg
gagaaacagggtgtacaagtcgtggagcgtgagatcaatttgcccgtggatctgatctta
agtgcagcagtatgtcttgtattgtatgattgcagaaacgttgggaagaaagcaacagtg
acagatgaagcttcttcttgcatcactttgtatgtcgagcacattgctacagatgttttg
acatcattgagtttttctttcagcagttgcattttgatatttgagggtgaaagcagcttt
cttgctggcataatggattcatcagatgcactgtatgctgctgcagctagcctgggatta
gatttgcaactcttttgctcatattcgtcggagttaactgatgacattatcatgagctgc
atcatatatgccactaagttaaataaaggcctatatccaaaaatgtttgaatctgaaacc
ctagcagagtcattccttaccagctttccgtcaattaatccactctcagctcatgcaatt
cttactactggaggcaagcttgttgaatttcttgaatggtcacatgattgcagaatccag
gctatttggaagtatcatgttcctgatgaaagccttgccctatttagtgctctgtgtaga
tatggggaacgggaggagtccaaatctggaatgacacagtgttcgtcttcagtatcttct
gttccagactcaggaaacagtcactgtaaaactgaatgtgataggaaaaggaggaaatac
atgatagatgctcacaaatttcagatgcctatggaggagttgctttttgatgcaccacat
caatctacagatggcatcctgaagccttctagggtgtcccagccatatcattcacatgtc
tcttccataggtcctgagatatttgatagggttgggggtgccagtttgtctgtgagtgat
caatggtctgaacagaaagaggatttgaatatttctatcatgaatgatttggattggaat
ggtaatgactttgagaatttgcacagggactttaaaggtgaagttatagacctcaattat
agttcattacttggggaggacttctccaatgcgaacgccacaaatttctcaacaagagtg
caagatataaggtgcaatcctaccccaacaaattctacagtttcaagaacatcattattt
ggcacaaaggatcttacttgcttgccagcatccttagaaatcaattttggctcagatatc
tgcagtctccaaaaggatcaaaatcaaaagttgaagggaagcatttgtgcacagctggat
ctagagttggacaaggatacattaccaatgaaatgccaaaaggaactcttgaaagggaga
aaagcaaagggatcaactgaagatggtggtggactgttatttccatatgctgagacacca
ctctctcatattattcattcatcagaaccgcaacagagatcaccctggacaatggaattc
cttaacagaatcaaggaaaaaagcaagatgcaccaacaatcccttccatgcgatgctacc
atctcttgttttgggtgccatgggaatgtacaaaaagtagctaagaaaagcccatctgtc
cttgatggtttcaggtatcaaggaggcacctacccgaaaaaaataatgaaacagaagcag
cagaagagacttgtgcaaccaagttcatctaagaatgtgaaggcttcagcctcctttctc
ccaatatgtactcccactgataagagagcaagacagactctttcttttgtgaggaatgga
aatggaacacaaagtaagctggtttgggctgatggaaatgttcattgtctgaggaaaaga
ttacgaaatgaactatga
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