Macadamia integrifolia (macadamia nut): 122082424
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Entry
122082424 CDS
T07436
Name
(RefSeq) pre-mRNA splicing factor SR-like 1 isoform X1
KO
K12850
pre-mRNA-splicing factor 38B
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122082424
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ming03041
]
122082424
Spliceosome [BR:
ming03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
122082424
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Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
122082424
NCBI-ProteinID:
XP_042505910
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Position
6:9995694..10022074
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AA seq
450 aa
AA seq
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MEIQTSGKPIDSLLEKVLCVNILSSDYFKELYRLKTYHEVIDEIYNQVDHVEPWMTGNCR
GPSTAFCLLYKFFTMKLTVKQMHGLLKHPDSAYIRAIGFLYLRYVADSKTLWTWFEPYLK
DEEEFAPGSNGRMTTMGVYVRDLLLGQYYFDTLFPRTPVPIMRQIVANLEKMKLPSKHSG
VTGESSRHGSDDTARRPPSVKAALSVSFGQRAPHRASTRDSSPVRRTLPPHDRNNGDDAR
RSPSSHRSRSREFSDRDHSDRDRDRDRERERERDRTRERDRNRERERDREKDKEWDRDSE
REWDRDRDKNRDRKHEYDRHGVHERRDYHRSKYADGDRESSRRDHESTRRDGSRHRESTS
RRSRSRSQSQSRSRSRSRSRSRSLQVHNHHPSPPRDGNKEKTPTLASSNLAKLRDLYGDT
GDQKGYSGPDRGPKDSSTEEVIRLGGSTWK
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggagatacagacttcagggaagccaattgattccttgctggagaaggtcttgtgtgtc
aacatcctttcttcggattattttaaagagctttacagattgaagacttaccatgaagtt
atagatgagatttataatcaagttgatcatgtggagccatggatgactggaaactgtagg
ggcccttcgacagcattttgtctgctgtacaaattttttactatgaagctcacggtcaag
caaatgcatggcctcttgaaacatcctgattctgcttatattagagcaattggattcctc
tacttaagatatgtagctgactcaaaaactttgtggacctggtttgagccttatctcaaa
gatgaagaggaatttgcaccaggatcaaatggtcgcatgacaacaatgggtgtatatgtg
cgtgatttgcttcttggacagtattacttcgatacccttttccctcggacacccgttcct
atcatgcgacagattgttgcaaaccttgagaagatgaagctcccttccaaacactctggt
gtcacgggggaatctagccgacatggatctgatgatactgctcgtcgaccaccttctgtg
aaagctgctctttcagtctccttcggtcagcgtgcgccccatcgtgcttccacgagggat
tcatcaccagttaggcgtacactgcctcctcatgacagaaacaatggggatgatgctcga
agatctcccagcagccatcgcagccggagccgtgaattttctgatcgtgaccattcagac
agggatagggaccgggaccgggagagggaaagggaaagggacaggactagagaaagggac
agaaatagagagagagaaagggatagggaaaaagataaggaatgggacagagacagtgag
agggagtgggacagggacagagacaaaaacagagataggaaacatgagtatgatcgacat
ggggttcatgagagaagagactatcacaggtccaagtatgccgatggagatagggaaagt
agcagacgggaccatgagagtactcgtcgtgatggtagcaggcatagagaatctacctct
cgccggagtaggagtagaagccaaagccaaagccgaagccgaagccggagccggagccgg
agccggagcttacaagtccacaatcatcatccgagtccacctagagatggaaacaaggag
aagacacctacacttgcatctagcaatctggccaagttgagggatctatatggggataca
ggcgatcaaaaagggtatagcggcccagataggggtcccaaagacagcagcactgaggag
gtgattagacttggtggttctacttggaagtag
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