Macadamia integrifolia (macadamia nut): 122083018
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Entry
122083018 CDS
T07436
Name
(RefSeq) nuclear pore complex protein NUP96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122083018
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ming03019
]
122083018
03036 Chromosome and associated proteins [BR:
ming03036
]
122083018
Messenger RNA biogenesis [BR:
ming03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122083018
Chromosome and associated proteins [BR:
ming03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
122083018
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Motif
Other DBs
NCBI-GeneID:
122083018
NCBI-ProteinID:
XP_042506658
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All DBs
Position
1:28541492..28557241
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AA seq
1066 aa
AA seq
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MASTSSAPSPGIFDKVCVVRNNVSLETYGGSDFDTGTLSSYLPSQCKKRRISIDMYNPSC
WAFRDIKACLPVLHSSDYFMEPSLLDLAAQELNVPGHCCHVQNFTVGRFGYGCVKFLGET
DIRWLELDKVIKFDRHRVVVYEDETDKPAIGEGLNKAAEVTLVLQIKPLADERFKLDKIV
EKLKIITEKQGARFVSFNPLNGEWKFLVCHFSRFGLSEDDEDDIIMDEAAAAHHLEEQNG
GELFEVDEVPQIGPDVAVLSHSLPAHLGLDPIKMQEMRMVMFPAEEEETEDFDGTFSLEK
QSFSREFGRPALQYSSRKMSHRVSPPIVRKTPQALLEYNMKGSDQPGNILMTRQNLSIVP
RTTKVKGFQLDLKDETPVTGHHSKYAVDAGLFMGRSFRVGWGPNGVLVHCGNPVSSTGPG
VLSSIVHVEKIAINKVVRDENNKVKEELNDCCFASPLSLHKSISHETMEVEVEGSFRLKL
QKVVSDRLVLPEICRSYIDIIEKQLDVPCLSASARGVLMHQVMVWELIKVLFSAREISGH
SISVDVDDEEDMMGDKKDGSPDIDPEALPFVRRAQFSYWLQESVCHQVQEEISCLNESCD
LEHIFLLLTGRQLDVAVELSASRGDVRLACLLSQAGGSTVNRSDMARQLDLWRINGLDFN
FIEKDRLRLYELLAGNIQGALQNSKIDWKRYLGLLMWYQLPPDTSLSAIIHTYQQLLDAG
KAPYPIPVYIDEGLVEEAVDLSDGDRFDLAYYLMLLHANEESEFGVLKTMFSAFSSTFDP
LDYHMLWHQRSVLEAVGAFCSNDLHVLDMSFVSQLLCLGQCHWAIYVVLHMPYRDDFPNL
QATVIREILFQYCESWSSQERHHQFIKDLGVPSAWLHEAMAVYFHYEGDLLKALEHFVEC
SNWQKAHSIFVTSVAHSLFLSAKHLEIWRLAVSMEEHKSEIANWDLGAGIYISFYVLKDS
IRDGAMYDPDSLEKNKASCREFFDRVNASLAVWGSRLPVDARATYSVMAEELCTILISDG
GEAATYEDQLSCFETMFKAPLPEDLHECHLQDAVSAFTCYLTEIAS
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctacttcttctgctccttcacccgggatttttgataaggtttgtgttgttaga
aacaacgtttcattagaaacttatggtggcagcgactttgatactggaactttgagctcg
taccttccatctcaatgcaagaaaagaaggatttctattgacatgtataatccttcatgt
tgggctttcagagacatcaaagcttgcttgcccgttttgcattcatctgattattttatg
gaaccttccctattggacttggctgctcaggagctcaatgttcctggccactgctgtcat
gttcagaatttcacggttggaaggtttggatatggttgtgttaagtttcttggtgaaact
gatatcagatggttggaattagataaagttattaagttcgataggcatagggtagtggta
tatgaggatgaaactgacaagcctgctatcggtgagggtcttaataaagctgctgaagta
actttggtgcttcaaataaaaccattggctgatgagaggtttaaattggataaaattgtt
gagaaacttaagatcatcacagaaaaacagggagcgcgcttcgtttcctttaacccattg
aatggtgaatggaaatttttggtttgccattttagcagatttggattaagtgaagatgat
gaagatgatatcatcatggacgaagcagctgcagctcatcatcttgaggagcagaatggt
ggtgagctgtttgaagttgatgaagtgcctcaaattggtcctgatgtagctgttctatcc
cattctctgcctgctcatcttgggctggatcccatcaagatgcaagaaatgagaatggtg
atgtttccagctgaggaggaggaaactgaagattttgatggaacattttcacttgagaaa
cagagttttagtagagagtttggcagacctgctttacagtattcctccaggaagatgagt
catagagttagtcctcccattgtgcggaaaacccctcaagccttacttgagtacaatatg
aaaggttcagaccaaccgggaaacattctgatgactcgtcaaaacctgagcattgtacca
aggacaacaaaagtaaaaggcttccaattggatcttaaagatgaaactccagtaactgga
caccattctaagtatgcagttgatgcaggattgttcatgggaaggtcttttcgggttggt
tggggtccaaatggtgttcttgtccactgtggcaatcctgttagtagcacgggtcctggt
gtattatcttctattgtccatgtagaaaagattgcaattaacaaggtggtcagagatgaa
aataataaagtgaaagaggagcttaatgattgctgttttgcctcaccactgagcctccac
aagtcaataagtcatgaaacaatggaagttgaagttgaagggtcattcagactaaagctt
caaaaggttgtatctgatcgcctagtgcttccagagatctgccggagttatatagatatt
attgagaagcagctggatgttccttgcttatctgcttctgcccgtggggttctgatgcac
caagttatggtctgggaattgataaaggttctattttctgccagggagatcagtggacat
tcaatatccgtagatgttgatgatgaggaggatatgatgggtgataagaaagatggttct
ccagacattgatccagaagcactcccttttgttcggagggcacaattcagttattggttg
caagaaagtgtttgccaccaagtacaagaagaaataagctgtttaaatgagtcctgtgat
ttagagcacatcttcctacttctgactgggcggcagcttgatgttgcagttgaattgtct
gcttccaggggagatgtaagactggcttgtttgctgagtcaggctggtgggtcaactgtg
aatcgatctgatatggctcggcagcttgacctttggagaatcaatgggctggactttaac
tttattgagaaggataggttgaggttgtatgagttacttgctggtaatattcaaggtgct
ttgcaaaattcaaaaattgattggaaaagatatctagggttgttgatgtggtatcagtta
ccacctgatacttctttatctgccatcattcacacatatcagcagctccttgatgctgga
aaggctccatatccaatcccagtttacattgatgagggactggttgaggaggctgtggac
ctgagtgatggggatcgctttgacttagcctattatcttatgcttcttcatgcgaatgaa
gagagtgagtttggggtcttgaagactatgtttagtgcattttcttcaacctttgatcca
cttgactaccatatgctttggcatcaacgcagtgtattggaagctgttggtgctttctgt
tctaatgatctccatgtacttgacatgagttttgtttctcaactgttgtgtcttgggcaa
tgtcattgggccatctatgttgtcctccacatgccttaccgtgatgatttcccaaatctc
caggccactgttattagggaaatcttgtttcaatactgtgagtcctggagttcacaagaa
agacaccaccaatttattaaagacttgggtgttccatcagcatggctgcatgaggctatg
gcagtatatttccattacgaaggggatctactgaaggcccttgaacattttgttgaatgt
tccaattggcaaaaagctcattcaatttttgtgacttccgttgctcattctttgttcttg
tctgctaaacatttggagatttggagacttgcagtctccatggaagagcacaaatcggag
attgcaaactgggacttgggtgctgggatttatatttctttttacgttttaaaagattct
atacgagatggtgccatgtatgacccggattctcttgagaaaaacaaagcttcttgtaga
gagttctttgaccgcgtaaatgcgtcgttggcagtatggggaagcagattgccagttgat
gcgagagcgacatattctgtgatggctgaggagttatgtactattcttatatcggatggt
ggagaggccgcaacgtatgaggatcagttgagctgctttgaaacgatgttcaaagctcct
ctcccagaagacctgcacgaatgccatcttcaggatgcagtatcggccttcacttgttat
cttactgaaatagcttcatag
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