Macadamia integrifolia (macadamia nut): 122084046 Help Entry 122084046         CDS       T07436                                  Name (RefSeq) symplekin isoform X1   KO K06100   symplekin Organism ming  Macadamia integrifolia (macadamia nut) Pathway ming03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:ming00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     122084046  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:ming03021]     122084046    03019 Messenger RNA biogenesis [BR:ming03019]     122084046 Transcription machinery [BR:ming03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      122084046 Messenger RNA biogenesis [BR:ming03019]  Eukaryotic type   mRNA processing factors    3' end processing     Cleavage stimulation factor (CSTF) complex      122084046     U7-dependent histone pre-mRNA processing factors      122084046 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Symplekin_C SYMPK_PTA1_N Motif Other DBs NCBI-GeneID:  122084046 NCBI-ProteinID:  XP_042507980 LinkDB All DBs Position 7:35447212..35496114 Genome browser AA seq 1345 aa AA seqDB search MAGASREQALSLIAAVKNHGDLAVKLSSLKQVKEILLSVEPSFAAEIFPYLTEIRTSPES LVRKSLVELVEDLGLKVMEHSSILMPVLLTLLKDDAPVVVRQSIVTGTYFYCSILEKMAL QFHQSGRVEKWLEELWMWMAKFKDDAFGIALEPGSVGTKLLAMKFLETYILLFTPDADDP ETSIKEGKGRTFNISWVVGGHPVLDTALFTLEANKALGLLLDQLQSASSLCGSLIIAVIN CLAAIARRRPLHYSSILSALLCFDPNFEALRGGHTASIQYSLRTAFLGFLRCTHPVIIES RERLLRALRAMNAGDAADQVIRQVDRMLKNTERASRDARFGKDDQPSSPLPSGDLVKKRT MLQDNDGSTNIDEVPGKRTRYGPQGNSAFPGEIPDDTRQDDIAVNGIAPKLPLLDSDLTP VEQMIAMIGALLAQGERGAESLEILISKIHPDLLADIVIANMRHLPKNPPPLLSRLGNGP VAPQTSSSSTSSQVAPSTPIISVQHSAAPLQVAPPFPSAVTSSTSMPDVSIVPSLPADYK RDPRRDPRRLDPRRVAVPGGVQSVSVSVKEDTDDMQSGIDSSASLGRPLPPPVVMKVESA SVPLVTKSEFELSESPVAPVTDQPTSEESLEVLDEIKKEEPVQEVKVITTSDVDLSPVTA VVQDAVASIPTDITMTEGVDPSCSLESDQHSPAGSSTSASEETSQDFPLLPSYIELTEEQ RKTVTKLAIERIIGSCKKIQLTDCSQTRMALLARLVAQMDADVDVIVMLQKHLVLDFQHQ KGHELVMHVLYHLHTLMISESDEHSSFAATMYEKFLLAVARSLWDTLPASDKSFSRLLGE VPHLPDSALKMLEELCCVDGSGLHVKDVRDGDRVTQGLGAVWSLILGRPLNRQGCLNIAL KCAVHSQDEVRAKAIRLVANKLYLISYVSESIEQFATAELLSVVDQHVPDTDPSPSGSTE QRTEGNLGTQETSISGSHNSEPGASENDSVKDSQVIQSVPAVSLSQAQRHMSLFFALCTK KPSLLKLVFDVYGRAPKSVKQAVHRHIPILVRTLGASKSELLHIISDPPQGSENLLMLVL QILTEETTPSADLIATVKHLYEAKLKDAAILIPMLSSLSKDEVLPIFPRLVDLPLEKFQA ALARILQGSAHTGPALTPAEVLVAIHDINPDKDGIALKKITDACSACFEQRTVFTQQVLA KALIMLVDQTPLPLLFMRTVIQAIDAFPTLVDFVMEILSKLVSKQIWKMPKLWVGFLKCA SQTQPHSFPVLLQLPPPQLESALNKHANLRGPLAAHASQPNIRTSLPRSMLVVLGLANEP HMQRSYLPSLHASDTSSSVHGTTLT NT seq 4038 nt NT seq  +upstreamnt  +downstreamnt atggccggagcttctcgagagcaagcgctttctcttattgctgccgtgaagaaccatggg gatttggcggtaaaactatcttctctgaagcaggtgaaagagattctgttatctgttgaa ccgtcttttgcagcggagatcttcccttacctcaccgagattcgaacgtcgcctgaaagt ttggttaggaaatctctcgtcgagttggtggaggatcttggtctgaaggtgatggagcat tcatctatactaatgccagtcctattgacactcttaaaagatgatgctcctgttgttgtg agacaatctattgttactggaacatatttctactgcagcatccttgaaaagatggcattg cagtttcatcaatctggtagagttgaaaagtggcttgaagaactttggatgtggatggct aagttcaaagatgatgcttttggcattgctttggagcctggttctgttggaacaaagttg ctggcaatgaaatttttggaaacatacatcctacttttcacgcctgatgccgatgatcct gaaacatctattaaagaaggaaagggacgaacctttaatatttcatgggtggttggaggc cacccagttctggatacagcgttgttcactttggaagcaaacaaagctcttggcctcctc ctggatcagctgcaatcagccagttctctttgtggttctttaataattgctgttatcaac tgtcttgcggctattgcgaggaggcggcccctccactatagtagtattctttctgcactt ctttgttttgacccaaattttgaggctctaaggggtggacacactgccagtatccagtat tctctaaggacggccttcctggggtttttaaggtgtacccatccagtgattatagagtca cgtgagagattactaagggctttacgggcaatgaatgctggggatgctgctgatcaagta attcggcaggttgatagaatgttaaagaatactgagcgtgcttcacgtgatgctcgattt ggcaaggatgatcaaccatcaagcccactaccttcaggggatttggttaagaaacggacc atgcttcaggataatgatggatcgactaatattgatgaagttcctggtaaacgaactcgt tatggtcctcaaggaaactcagcatttcctggcgagatacctgatgataccaggcaggat gatattgctgtaaatggaatagctcctaagctgcctttgctggacagtgacttgacacct gtggaacaaatgattgccatgattggtgctttactggcacaaggggaaagaggtgccgag tccctagaaattctaatatcaaaaatccatcctgatctgttggctgatattgtaatagct aatatgaggcacttacctaagaacccccctcccttattaagcagacttggtaatggtcca gtggctccacagacaagttcatcgagcacttcctcacaagtggcacccagcactcctatt atttcagtgcagcattctgctgccccattacaagttgcacctccatttccttctgcagtt acaagcagcacatcaatgcctgatgtctccatagtccctagtcttcctgccgattataaa cgcgacccccgaagggatcctcgtcgccttgatccacgtcgtgtggctgtacctggtgga gtgcagtcagtgtctgtgtctgtgaaggaggatactgatgacatgcaatctggaattgac agttctgcttctttgggtagacctcttccacctcctgtggtgatgaaggtggaaagtgct tcagtacctttggtaacaaaaagtgaatttgaactttcagaaagtccagttgctcctgta actgaccagccaacatctgaagaaagtttggaggttttggatgaaattaaaaaggaggaa ccggttcaagaggtcaaggttattactacttcagacgttgacctttctcctgttactgct gttgtccaggatgcggtggcatcaataccgacagatattaccatgacggaaggggttgat ccatcttgttcactggaatctgatcagcattctcctgctggctctagcacatctgcctct gaagagacctctcaagattttcctttgcttccttcttacattgagttgacagaagagcag agaaagactgtgactaaattggcaattgaaagaattattgggtcatgcaagaaaatacag ctgacagactgtagccagacacgtatggcgttacttgctcgtttggttgctcagatggat gctgatgttgatgtcattgtaatgctgcaaaaacatctagttttggatttccaacaccag aagggacatgagcttgtgatgcatgtactgtatcatctccatactctaatgatttccgaa tctgatgagcactcttcgtttgctgccactatgtacgaaaagtttctcctagccgtggca aggtctttgtgggatacactaccggcttcagataaatctttcagtaggcttcttggtgaa gttccacatttgcctgactctgccttgaaaatgttagaggaactttgttgtgtggatggg tctggtctccatgtgaaggatgtacgtgacggtgaccgtgtcacacagggccttggtgct gtatggagcttgatcttgggccgtccacttaatcggcaaggctgtttgaatatagcattg aagtgcgcggttcattctcaagacgaagtccgagcaaaagctatccgcctggtggcaaat aaactctatcttattagctatgtatcagagagcattgagcagtttgctaccgctgagctt ttatcagttgttgaccaacatgttcctgatacagatccttcaccatctggttccaccgag cagagaacagaaggaaatcttggaactcaagaaacatccatcagtggttctcataattca gagcctggtgcttctgaaaatgactctgttaaggattcacaagttatccaaagtgttcca gcagtttcgttgtctcaagctcaacgccacatgtcacttttttttgctctatgtacaaag aaacccagtctccttaaacttgtttttgacgtttatgggcgggctccaaagtccgttaag caggctgtccatcggcatatcccaattcttgtgagaaccctaggagcgtccaaatccgaa ttgttgcatattatttctgatccaccacaaggaagtgaaaatcttctgatgctggttttg caaatattgactgaagagacaacaccttctgctgatcttattgctactgttaaacattta tatgaagctaagttaaaggatgctgctattcttattccaatgctatcttctctttcaaaa gatgaggttttgcccattttccctcggcttgtggaccttccattggaaaagtttcaagct gcactagctcgcatattacagggttcagctcatacaggtccagctttaacacctgcagaa gtgttggttgccatccacgacattaatcctgacaaagatggaattgcacttaaaaagata acggatgcctgctcggcttgttttgagcaacgcacagtttttacacagcaagtcttggca aaggccttgatcatgctggttgatcaaacacctctacccctactattcatgagaacagta attcaagccattgatgcttttcctactctggttgatttcgtcatggagatactctccaaa cttgttagtaaacagatatggaagatgccaaagttgtgggtagggttcttaaaatgcgca tctcagacacaacctcattctttccctgttctattgcagttgccacctccacagcttgag agtgcacttaacaaacatgcaaacctcagaggcccacttgctgctcatgccagccagcct aacataagaacttcattaccaaggtcaatgctggtggttttgggtcttgctaatgaacca catatgcaaagatcttatcttccatctttgcatgcttcagacacaagttcttcagttcat ggtacaacgctgacttga

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