Macadamia integrifolia (macadamia nut): 122084076
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Entry
122084076 CDS
T07436
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 13
KO
K14805
ATP-dependent RNA helicase DDX24/MAK5 [EC:
5.6.2.7
]
Organism
ming
Macadamia integrifolia (macadamia nut)
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ming03009
]
122084076
Enzymes [BR:
ming01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122084076
Ribosome biogenesis [BR:
ming03009
]
Eukaryotic type
Pre-60S particles
Helicases
122084076
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
P-loop_SecA
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
122084076
NCBI-ProteinID:
XP_042508053
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All DBs
Position
7:complement(12033671..12053122)
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AA seq
795 aa
AA seq
DB search
MAGKTSSSSSLKRKRNIGAKPDVKRLDVLPWNSSLPEEDPFTLFDGSNDLEGGFLSLEEI
DESKYGFVIPEPGKGEEVVVVEPSHPSKSKKRKLQDADGGPAYDSEDTAEEKVEDEKKTK
NKNKKKKKKKKQQNIVPDAVEPEANANKDVEAESVVDETEFYAWNELRLHPMIMKSIYRL
GFKEPTPIQKSCIPAAAHQGKDVIGAAETGSGKTLAFGLPILQRLLEEREKAAKSSSEEG
SLLEKGPLRALIVTPTRELALQVTDHLKEVSKTISVRVVAIVGGMSTEKQERLLKARPEI
VVGTPGRLWELMSGGDKHLVELHSLSFFILDEADRMIESGHFHELQSIIDMLPMGIGFVD
GHNQATQNCVTVSNVQRKKRQTLVFSATISLSDDFRKKLKHRSLKSKNFMNDGISSIETL
SARAGMRADAAVVDLTNASIVADKLEESFIECREEDKDAYLYYILSVHGQGRTIVFCTSI
AALRHISSLLRILGIVVWTLHAQMQQRARLKAVDRFRGNEHGILVATDVAARGLDIPGVR
TVVHYQLPHSAEVYVHRSGRTARASADGCSIALISPSDRSKFASLCRSFSKESLQRFPLD
NSYMPEVMKRLSLARQIDKILRKDSEDKAKKSWLERSAASVEMILEDHDGEEERVNNYTK
KKTKSIHLQKLQQELKVNLSCPLQPKTFSRRFLAGAGVSSLLQNQFEELAKQKMGENGGS
GENKRGKLTVIGQDCVEPLQALRSAGHEARNRIDLKEMAEKQLKIQNIRSKRKEERKRLH
EKRRKERRRLKCGNE
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atggccggcaaaacttcttcttcgtcttctctgaaacggaagaggaatattggagcaaaa
cctgacgtgaaaagattggatgtactgccttggaactcatctcttcccgaagaggatccg
tttacgctttttgatggatccaatgacctcgaaggaggatttctttcccttgaagagatt
gatgaatccaagtatggttttgtgattcctgaacctggaaagggggaagaagtagtagta
gtagaaccttctcatccctccaaatcgaagaagcggaaacttcaggatgctgatggcggt
cctgcttacgactctgaagatactgcagaagagaaagtggaggacgagaagaagacaaag
aataaaaacaagaagaagaagaagaaaaagaagcagcaaaacatagtaccagatgccgtt
gaaccagaggccaatgccaacaaagatgtggaagcagagtcggttgttgatgaaactgag
ttttatgcatggaatgagttgaggctccatcctatgatcatgaaatcaatatacaggctt
ggattcaaggagcccacacccatacaaaaatcttgtatccctgctgctgcacatcaaggc
aaggatgtcattggtgctgctgagacgggatctggtaaaacacttgcatttgggctgccc
atcttgcaacgtctcctcgaggagcgagagaaagctgcaaaatcatcctcagaggaaggc
agtttactggagaaaggtcctcttcgggctcttattgtgactcctacaagggagcttgcc
ttgcaggtcactgatcatctcaaggaagtttccaaaactatcagtgtcagggtggttgcc
attgttggtggaatgtcgacagaaaagcaggagagacttctgaaagcgaggcctgagatt
gttgttggaactccagggaggctctgggagcttatgtcaggaggagacaaacaccttgtt
gagttgcactcgttgtctttttttatattggatgaggccgatcgaatgatagagagtggg
cattttcatgagttgcagtctattattgacatgcttcccatgggtattggctttgttgat
ggacataaccaagccacacagaactgtgtgacagtttctaatgtccagagaaagaaaagg
caaacactcgtcttttctgctactatatctctgtcagatgatttccggaaaaagttaaag
catagatcacttaaatcaaagaatttcatgaatgatggcattagttctatagaaactctt
tctgcgcgagcagggatgagagctgatgctgctgttgttgatttgacaaatgcttcaatt
gtggcagataaacttgaagagtcatttatcgaatgcagggaagaggataaagatgcttat
ttatactatattttaagtgttcatggacaagggcgaacaattgttttctgtacatcaatt
gcagctttacgtcacatttcatccctattacgtatccttggcatagttgtttggacccta
catgctcaaatgcaacagcgagctagattgaaggcagttgatcgttttcgtggaaatgaa
catggtatacttgttgccactgatgttgcagcaaggggccttgatattccgggtgttcga
actgttgttcactatcagcttccacattctgcagaagtttatgttcatagaagtggaaga
actgctagagcttctgctgatgggtgcagcattgcattaatatctccaagtgatagatcg
aaatttgcttctttatgcagatcattttcaaaggaaagtcttcaacggtttcctctagat
aactcttacatgccagaggttatgaaacgattatccttggcacgtcaaatagataagatt
ttgcggaaggattcagaggataaagcgaagaaaagttggctggaacgaagtgctgcatca
gttgaaatgattctagaggaccatgatggtgaggaagaaagagtcaacaattatacgaaa
aagaaaaccaaatctattcatttgcagaagttacagcaggagctgaaagtgaatctttca
tgcccattacagccaaaaacattttctcgacgctttctggctggggctggtgtttcttcc
cttcttcaaaaccaatttgaagaattggctaagcagaaaatgggtgaaaatgggggtagt
ggggaaaacaaaagagggaaactcacggtcattggtcaggattgtgtggagccacttcag
gcacttcgtagtgctggccatgaggcacgcaatcggatagatttgaaagagatggctgag
aagcaattaaagatacaaaatataagaagcaaacgaaaagaagaaagaaaacgtttacac
gagaagcgaaggaaagagaggaggagactcaaatgtggcaatgaatag
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