Macadamia integrifolia (macadamia nut): 122084145
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Entry
122084145 CDS
T07436
Name
(RefSeq) sm-like protein LSM1B
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122084145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ming03019
]
122084145
Messenger RNA biogenesis [BR:
ming03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122084145
mRNA degradation factors
5'-3' decay
Lsm complex
122084145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
122084145
NCBI-ProteinID:
XP_042508158
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All DBs
Position
7:1629015..1634352
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AA seq
128 aa
AA seq
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MSWAGPEDIFLSTSLASYLDKKLLVLLRDGRKLLGTLRSFDQFANAVLEGACERVIVGDL
YCDIPLGLYVIRGENVVLIGELDLEREELPPHMTRVSAAEIRRAQKAERDATDLKGSMRK
RMEFLDLD
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgggcaggcccggaagatatctttctctccacatctcttgcgagctaccttgac
aagaaacttcttgttttgctgcgagatggtcgaaaactgttggggacacttcgctctttc
gatcaatttgccaatgctgttcttgaaggtgcttgtgaacgggtgattgttggtgatctt
tattgtgacattcccttaggtctctatgtaattcgtggggagaatgttgtcttaattggt
gagctggaccttgagagggaagagcttcccccacatatgactcgtgtgtcagctgcagaa
ataagaagggcacagaaagcggaaagggatgctacagatcttaaaggctccatgagaaag
aggatggagttccttgatttggattga
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