KEGG   Macadamia integrifolia (macadamia nut): 122084145
Entry
122084145         CDS       T07436                                 
Name
(RefSeq) sm-like protein LSM1B
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
ming  Macadamia integrifolia (macadamia nut)
Pathway
ming03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ming00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    122084145
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ming03019]
    122084145
Messenger RNA biogenesis [BR:ming03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     122084145
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     122084145
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 122084145
NCBI-ProteinID: XP_042508158
LinkDB
Position
7:1629015..1634352
AA seq 128 aa
MSWAGPEDIFLSTSLASYLDKKLLVLLRDGRKLLGTLRSFDQFANAVLEGACERVIVGDL
YCDIPLGLYVIRGENVVLIGELDLEREELPPHMTRVSAAEIRRAQKAERDATDLKGSMRK
RMEFLDLD
NT seq 387 nt   +upstreamnt  +downstreamnt
atgtcttgggcaggcccggaagatatctttctctccacatctcttgcgagctaccttgac
aagaaacttcttgttttgctgcgagatggtcgaaaactgttggggacacttcgctctttc
gatcaatttgccaatgctgttcttgaaggtgcttgtgaacgggtgattgttggtgatctt
tattgtgacattcccttaggtctctatgtaattcgtggggagaatgttgtcttaattggt
gagctggaccttgagagggaagagcttcccccacatatgactcgtgtgtcagctgcagaa
ataagaagggcacagaaagcggaaagggatgctacagatcttaaaggctccatgagaaag
aggatggagttccttgatttggattga

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