KEGG   Macadamia integrifolia (macadamia nut): 122084330
Entry
122084330         CDS       T07436                                 
Name
(RefSeq) splicing factor U2af large subunit B-like isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
ming  Macadamia integrifolia (macadamia nut)
Pathway
ming03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ming00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122084330
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ming03041]
    122084330
Spliceosome [BR:ming03041]
 Complex A
  U2 snRNP components
   U2 related factors
    122084330
 Complex B
    122084330
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_occluded
Other DBs
NCBI-GeneID: 122084330
NCBI-ProteinID: XP_042508427
LinkDB
Position
7:complement(21338810..21348906)
AA seq 561 aa
MPDYGGRYDGNGEALNDYSSSPPHKTSSHGGADDYSDSKSRHGSREYVRESSRSREKERE
KSRDKERERDRDGERDRDRDRDRHHRDHYRERTDRRDRGRDRDDDDDYHRIRDYERRREY
DRDREGRHHHRSRSRSRGKSHHRSRSHSRSRSRSRSKSKRVSGFDMAPPTTALMPGAAAG
VAAGQLTGSTTTIPGMFPNMLQFPAQLATPLLMHPQAMTQQATRHARRVYVGGLPPTANE
QSVATFFSQVMGAIGGNSAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEG
APVKVRRPSDYNPSLAAALGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTE
VQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTV
RRANQGASQPKPEQESILLQAQQQVALQRLVFQGGALPTKVICLTQVVSADELKDDEEYE
DIMDDMRTEGAKYGTLVNLVIPRPGPNGELFPGVGKVFMEYTDADGATKARSGLNGRRFG
GNVVTANYYPENKFSQGDYEG
NT seq 1686 nt   +upstreamnt  +downstreamnt
atgccggattacggaggaagatatgatggtaatggcgaagcgctcaacgattacagttca
tcacctccgcataagactagcagtcatggcggtgcggatgattatagcgactctaaatcg
cggcatggatcccgcgagtatgtcagagagtcttcaagaagtagggagaaggaaagagaa
aaaagcagggataaggagagggagagggacagggacggggaaagggatcgagatagagat
cgggatcgtcaccatagagaccactatagggaacggactgacagaagggaccgtggtcga
gatagagacgacgatgatgattatcaccgaattcgagactatgagaggcgtagagaatat
gatcgagatcgggaagggagacatcatcatagatctcgatctcgttcaaggggtaaatct
catcatagatcaagatctcactctcgatctcgatctcgttcaagatcaaagagcaagcgg
gttagtggttttgacatggctcctccaacgactgcattgatgccaggagctgctgctggt
gttgctgcaggtcaattgactgggtccacaacaaccatccctggaatgtttccaaatatg
ctacaatttcctgcacagctggcaaccccactcttgatgcaccctcaggcaatgactcaa
caggcaacaagacatgctcgacgggtttatgttggtggccttcctccgactgcgaatgaa
cagtcagtggcaactttcttcagccaggttatgggcgcaattggaggaaattctgctgga
ccaggagatgctgttgttaatgtatacattaaccatgagaagaagtttgcatttgttgaa
atgaggtctgttgaggaggctagtaatgctatggccttggatggtattatttttgagggt
gcgccagtgaaggtgaggcggccaagtgattacaacccttctcttgctgcagcacttggg
ccaagtcaaccaaatcccaatctcaacctagctgccgtaggattaactccaggttctgct
ggtggactcgagggtccggatcgaatctttgttggtgggcttccgtactatttcacagaa
gtacagatacgggagcttttagaatcctttgggccccttcgtggttttgatcttgtcaag
gacagggaaacagggaactcgaaaggttatgcattttgtgtgtatcaagatctgtcagta
actgacatcgcttgtgcagctctcaatggaataaaaatgggtgataaaactctcactgtt
aggcgtgcaaatcagggtgcttcacagccaaaacctgagcaggagagtatattattgcag
gcacagcagcaggtagcattgcagagacttgttttccaaggtggtgcactacctaccaag
gtcatatgcttaacacaggtagttagtgcagatgagctaaaagacgatgaggagtatgaa
gacataatggatgacatgagaacagaaggcgctaaatatgggacactggtaaatttagtc
attcctcgtcctggaccaaatggcgagttgtttccaggagttgggaaggtattcatggag
tatacagacgcagatggagctacaaaagccaggtcagggttgaatgggaggagatttggt
ggcaatgtagtcacagccaattattatccagagaacaagttttcccagggcgactacgag
ggatag

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