Macadamia integrifolia (macadamia nut): 122084437
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Entry
122084437 CDS
T07436
Name
(RefSeq) pre-mRNA cleavage factor Im 25 kDa subunit 1
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122084437
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ming03019
]
122084437
Messenger RNA biogenesis [BR:
ming03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
122084437
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Ortholog
Paralog
GFIT
Motif
Pfam:
NUDIX_2
NUDIX
Motif
Other DBs
NCBI-GeneID:
122084437
NCBI-ProteinID:
XP_042508600
LinkDB
All DBs
Position
7:2527495..2530720
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AA seq
212 aa
AA seq
DB search
MENGTISSLNNNISGGYVLDIYPLSGYYFGSKEAIANKDETLADRVQRLKTNYAANGLRT
CVEGVILVELFKHPHLLVLQVRNSFYKLPGGRLRPGESDIAGLKRKLSSKLSVIEHGLDD
DWEIGECLGMWWRPDFETIFFPYLPPNTRRPKECTKLFLVKLPANRKFIVPRNMKLLAIP
LCQIHGNHKTYGPIISGVPQLLSKFSFNIIES
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatggaactatttcttctttaaataataacatcagtggtggttatgttctggac
atttaccctcttagcggttactactttggatccaaagaagccattgcaaacaaagacgaa
actttagctgatcgtgtacagaggctgaaaaccaactacgccgcgaacggtttgaggacc
tgtgtcgaaggagttatcctggttgagctgtttaaacatcctcatttgttggtactgcaa
gtaaggaactctttctataagcttcctggcggccgcttaagacctggtgaatcagatatt
gctgggctgaagcgcaagctttcgagcaagctctctgttattgaacatggcttggacgat
gactgggagataggagaatgccttggaatgtggtggaggcctgactttgaaactatattt
tttccatatttgccaccaaatacaagaaggcccaaggagtgcacaaaactctttcttgtg
aagttgcctgctaataggaagttcattgtaccaagaaatatgaaattgcttgctattcca
ctttgccaaatccatggaaatcataagacatatggtccaatcatttcaggagtcccacag
ctgctatcaaaattctccttcaacatcattgaaagttga
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