Macadamia integrifolia (macadamia nut): 122084684
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Entry
122084684 CDS
T07436
Name
(RefSeq) squamous cell carcinoma antigen recognized by T-cells 3 isoform X1
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
ming
Macadamia integrifolia (macadamia nut)
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ming03041
]
122084684
03036 Chromosome and associated proteins [BR:
ming03036
]
122084684
Spliceosome [BR:
ming03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
122084684
Chromosome and associated proteins [BR:
ming03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
122084684
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
RRM_1
TPR_14
UTP6_C
HAT_Syf1_CNRKL1_C
Lsm_interact
xRRM
NumbF
HAT_Syf1_M
Motif
Other DBs
NCBI-GeneID:
122084684
NCBI-ProteinID:
XP_042509053
LinkDB
All DBs
Position
7:complement(11599145..11632336)
Genome browser
AA seq
822 aa
AA seq
DB search
MAETSDVEMKTLEKTHNGIEVDSAMENPSSSESESDDDAEDLRVEALEKELAENPSSYEA
HVQYVKSLRRLGQIEKLREARESMNTLFPLSPAMWQEWVKDEASLSTGPETFVVIEKLFE
RGLHEYLSVSLWCDYITYVQEHDPSVQEYSPAGILKMRNLFERALTAAGLHVVEGNKIWE
AYRKFEQAIFHTIDDSDREEKEKQVNRIRSIFHRQLSLPLADLRSTLTAYKAWEVEQGTA
PVVDPGELDGLPSNVVSAYQKAMEMYNAKVQHEEKISKQDASDMEKLQHYMTYLKFEQSC
GDPARIQILYERAITEFPLSSDLWLDYTRFLDHTLKVPSVARDVYSRAIRNCSWIGELWS
RYLLSLERGHASENELSAVFEQSLQCTFSSIEEYLDLYLTRIDGLRRRISLSGPADYALD
YALIRDTFQRAADYLSQYLKAEGCLLHNLHLHAYWARLELKLGNDPVAARGAWESLLKTS
GSMIEAWQGYIGMEIELGHIHEARSIYKRCYSKRFNGTGSEDICHSWLRFEREYGTLGDF
DHALRKVTPRLEELKLFISQQQSTHLAASATQKERAPAKNVSQKRGSSLTDEQTPPKKQK
KDSTQKSGTKKERLNEVKANKPENSDEQQVNDSGAGKTKFYTDECTVFVSNLGLEATEGH
LRDFFSDIGGVTAIRILKDKFTGKSRGLAYVDFSDSTHLAAAVSKNRQTLLGRKLSIAQS
DPKRSQKRVSFGASTAPDHGAGHEEPIAASKESTEPRKSSSVSTRREDRVQLKGKNTFAV
PRTLVRPLGWSKNEQTSEGDEKPKSNDEFREMLLKSKKVDKK
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaacctctgatgtagaaatgaagaccctcgagaaaactcacaacggaatagaa
gttgattcagccatggaaaaccctagttcttccgaatcggagtcggacgatgacgccgaa
gatctccgagtggaagccctagagaaagaactggcggagaacccgtcgagttacgaggct
cacgtccaatacgtaaaatcgctgaggagactcggccagattgagaagctacgtgaagca
agggagtcgatgaatactcttttccctttaagccctgcaatgtggcaggagtgggttaag
gacgaagcttcactgagcactggacccgagacttttgttgtgattgagaagctgtttgag
cgaggtctccatgaatatctatctgtgtctctttggtgcgactacattacttatgtacaa
gagcatgatccatcagttcaggaatattcaccagctggtatcttgaaaatgaggaactta
tttgaacgtgctcttactgctgctggattgcatgttgttgaaggcaataagatctgggaa
gcatatagaaagtttgagcaagctatctttcatactattgatgatagtgacagagaggaa
aaagaaaagcaggtcaatcgaattcgaagtatattccatcgtcagttatctttgcctctg
gctgacttaaggtcaacacttactgcctacaaggcttgggaggttgaacaagggactgct
cctgtagttgaccctggtgagctggatggacttccttctaacgttgtttcagcatatcag
aaggccatggaaatgtataatgctaaggtccagcacgaagaaaaaatttctaagcaagat
gcatccgacatggagaagcttcaacactacatgacatacttaaaatttgaacagtcatgt
ggtgatccagctcgcatccaaatcctgtacgaacgtgccatcacagagtttcctttatca
agtgatctatggcttgattatactcgctttttggatcacacattgaaggttcccagtgtt
gctagggatgtatattccagggccatcagaaactgttcctggattggagagctttggagt
cgatatttgctttccttggagcgtggtcatgcttctgaaaacgagttgtctgctgtcttt
gagcagtctttgcaatgtactttctcgagcatcgaagagtatctggatttatatctcact
cggatagatggtttacgacgaaggatttcattatctggtccagcagattatgccttagac
tatgccttgatcagggacacatttcagcgtgctgcggattacctctctcaatacctaaag
gctgaaggttgtttgttgcataatttgcatttacatgcttattgggctcgtttagaatta
aagcttggaaatgatccagttgccgctcggggagcttgggagagcctgcttaagaccagt
ggttcaatgattgaggcctggcaaggttatataggaatggaaattgagttgggtcatatc
catgaagctagatctatctataagagatgctacagtaaaaggttcaatggaactggttca
gaggacatatgccattcttggttgcgctttgagcgggaatatggtactttgggagatttt
gaccacgctttaaggaaggtgactccacgccttgaagagcttaagttattcatatcgcaa
caacaatccacacatcttgctgcatcagcaactcagaaagagagagctccggcaaaaaat
gtctcacaaaaaagaggatcaagtttaacagatgaacagactccaccaaagaagcagaag
aaggattcaactcagaagtcaggtacaaagaaagagagactcaatgaagtcaaagctaac
aaacctgaaaactcagatgagcaacaagtcaatgattccggagctgggaaaacaaaattt
tacactgatgagtgcactgtgtttgtttcaaatcttggcttggaggcaactgaaggacat
ctgcgtgatttctttagcgacattggtggagtcaccgctatacggatcttgaaggataag
ttcactggcaagtcaaggggacttgcctatgtggatttctcggatagtacacaccttgca
gcagctgtatcaaagaacagacagacattgcttggtagaaaattgagcattgcacagtca
gatccaaaacgaagccaaaagagggtttcctttggagctagcactgcacctgatcatggt
gcaggacatgaagaacctattgctgcttctaaagagtccactgaacctcgtaagtcatct
tctgtttccactaggcgtgaagaccgggtccagctcaaggggaagaacacatttgcggtg
ccaaggactctggttagacccctgggatggagtaagaatgaacagacgagtgagggggat
gagaagccaaaatctaatgacgaattcagggaaatgttgctcaaatccaaaaaggttgac
aagaagtag
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