Macadamia integrifolia (macadamia nut): 122084898
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Entry
122084898 CDS
T07436
Name
(RefSeq) LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 54, chloroplastic
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
ming
Macadamia integrifolia (macadamia nut)
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ming01009
]
122084898
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ming04131
]
122084898
Protein phosphatases and associated proteins [BR:
ming01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122084898
Membrane trafficking [BR:
ming04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
122084898
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54
Vps54_N
GrpE
EXOC6_Sec15_N
Syndetin_C
DUF1400
Motif
Other DBs
NCBI-GeneID:
122084898
NCBI-ProteinID:
XP_042509252
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All DBs
Position
7:30086728..30164467
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AA seq
982 aa
AA seq
DB search
MDASSPPGSFSVVERTSSNNSLALGRTSSASIRSLTEHESSASSSFGGSQSLASILNNPH
VGKSGVYGSDASWVGWWSSSSGGGPPELAPLTLNKAVSFTEVNRSDFQPYLASILESYAK
FEDIRHHATKENSDSVETSLASLNSLSITGAGEGEVARGQGEALVACLREVPSLYFKEDF
ALEDGGTFRAACPFSTLSENVVLQEKLSQYLDVVELHLVKEIALRSDSFFEAQGQLQDLN
VKIVEACGRIRELKETIRLLDLDLVDSARQIQELNATRGNLLALQQKLRLILNVNQALSA
LKLLVAAADCAGALDVIDDLQNLLDGDDLTGLHCFRHLRDQLATSLDSINSILSAEFMRA
SMHDIKDADWVILSEVKAKASNLTNGKDEEVKLDEEETANFHDRLLPLIIGLLRTMQAHL
LRAAEVKKAIEWIMSNLDDYFAAESVATAVARGAAAAELAQDTDGLLSSPVPYSLQRTAS
KASFQGKSNDASSPSNMSRNFRADVLRENTEAVFAACDAAHGRWAKLLGVRALLHPKLRL
PEFLSIYNITQDFISATEKIGGRLGYSIRGTLQSQSKAFVDFQHDSRMAKIKAVLDQETW
VAVDVPDEFQAIVDSXLCSESLINGSQVDAHGNMAASYVDQVSKTSAPLLVDGGGSYTQQ
HIEQPDSVETLEDDGGQIKSTSLAGGHHGSRTDVSALSTRNEDGNMKEHGKSSSQTLVYK
GLGYHMVNCGLILLKMLSEYIDMNNCLPVLSPEIVHRVVELLKFFNTRTCQLVLGAGAMQ
VSGLKSITSKHLALASQVISFTCAIIPEIRRVLFLKIPESRKALLLSEIDRVAKDYKVHR
DEIHTKLVQIMRERLLVHLRDLRRIVESWNRPEDNDLQPSQFARSLTKEVGFLQRVLSRT
LHEADVQAIFRQVVQIFHHQISEAFSQLEITTPQAKKRLHRDIQHILGCIRSLPSDNISA
VGVPNSGELDEFLMQMFGPEEG
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atggatgcatcttccccgccgggaagcttctcggtggttgagaggacaagcagtaataac
agtttggctctcggtcgaaccagttcggcttcgatcaggtcgcttacggagcacgaatcg
tctgcatcttcgtcttttggtggtagccaaagcttagcttcgattctgaacaatccacac
gttggcaagtctggtgtttatggctctgatgcttcttgggtgggttggtggtcttcttcg
tcaggcggtggtcctcctgaattggcccctttgacgctgaacaaggcggtctccttcacg
gaggtgaaccgatccgatttccagccttacctggcttcgatcttggagtcatatgcaaaa
ttcgaggacatcaggcaccatgccactaaagaaaatagtgactcggttgagaccagtttg
gcatccttgaattctttgagtattaccggtgccggagaaggggaggtcgcccgtggtcaa
ggcgaagctcttgttgcgtgtctgagggaagtcccgtctttgtatttcaaagaggatttt
gcgttggaagacggggggacatttcgtgcggcttgccctttctcgactctatcggagaat
gtggtgttgcaggagaaattatcgcagtacttggatgttgtcgagttgcacttagtgaag
gagattgcgcttcgatcggattctttctttgaagctcaggggcaactgcaagacttgaat
gtcaagattgtggaggcatgcggtcggatccgcgaactgaaggagaccataaggctccta
gacttggatttggttgattccgccaggcagattcaggagttgaatgcgacgaggggcaat
ctgttggctctccaacaaaaactgaggctcatcttaaatgtgaaccaagccctttcagct
ctgaagctgctagttgcagcagcagattgtgctggagcattggatgtcattgatgacttg
caaaatttattggatggtgatgaccttaccggtcttcattgcttccgtcacctccgggac
cagttagcaacatctttggattccataaacagcattctctcagcagagttcatgcgtgca
tctatgcatgatatcaaagatgcagattgggtaattttatcagaagtgaaagcaaaggct
tcaaatctcaccaatgggaaagatgaagaagttaagctggatgaagaggaaactgccaac
tttcatgatcgtcttctcccccttattattggattgctcagaacaatgcaggcacattta
ttgcgggctgctgaagtgaaaaaagccattgagtggattatgagcaaccttgatgattac
tttgctgcagaatctgttgctactgctgttgcacgtggtgcagcagctgccgaactagct
caagatactgatggtctgcttagttcccctgtgccttattcccttcaaaggacagcttct
aaggcttcgtttcagggaaagtcaaatgatgcttcaagtccatcaaatatgtcaagaaat
ttcagagctgatgtgcttcgagaaaatacagaagctgtgtttgcagcttgtgatgctgct
catggaagatgggcaaaactcctcggtgtccgtgctcttctgcatcctaaattaagattg
ccggagtttttaagcatttacaacatcactcaggatttcataagtgctactgagaagatt
ggtggaaggttgggctatagcatccgcggaacactgcagtcccagtcgaaagcctttgtt
gattttcaacatgactctagaatggcaaagattaaggcagtccttgaccaagaaacatgg
gttgcggtagatgtacctgatgaattccaggctatcgtggactcanctctttgttctgaa
tctttgatcaatgggagccaggtcgatgctcatggtaatatggcagcaagctatgttgat
caagtctcaaaaaccagtgctccgctcttggtagatggtgggggatcttatacgcaacag
catattgaacagcctgactctgttgagaccttagaagatgatggtggacaaatcaaatcc
acttcattggctggtggacatcatggaagtagaacagatgtttcagctctttctactcga
aatgaagatggtaacatgaaggaacatgggaaatcttcctctcaaaccctggtatataaa
ggtcttggttatcatatggtgaactgtgggttgatattgctgaagatgctgtcagagtac
attgatatgaacaattgtttgccagtgttgtcacctgaaatagtgcaccgtgttgtagaa
cttttaaaatttttcaacacaagaacatgtcagcttgttcttggtgctggtgccatgcag
gtgtctggtttgaagtccattacttctaaacatttggctcttgcaagtcaggttattagt
tttacctgtgctattattccagaaatcagacgtgttcttttcctcaaaatacccgagtct
cgtaaggcacttctgttgtccgagattgatcgagtagctaaggattataaggttcatcgt
gatgagatacatacaaaactagtacagataatgagggaaagattgctcgtacatttacgt
gacttgcgtcgaattgttgagagttggaatagaccagaggacaatgatttacagcctagt
cagtttgctaggtccttgaccaaggaagtaggctttctacaacgtgtcttatctcgaact
cttcatgaggcagatgttcaagcaattttcaggcaagtggttcaaattttccatcatcaa
atttcggaagcattttcacagttagagattaccactcctcaagcaaagaaaaggctgcat
agggatattcaacatattcttggatgtattcgctcattgccttctgataatataagtgca
gttggtgtgccaaattctggggaacttgatgaattcttgatgcaaatgtttggacccgaa
gagggctga
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