Macadamia integrifolia (macadamia nut): 122085854
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Entry
122085854 CDS
T07436
Name
(RefSeq) transcription elongation factor SPT6 homolog isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
ming
Macadamia integrifolia (macadamia nut)
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ming03021
]
122085854
03036 Chromosome and associated proteins [BR:
ming03036
]
122085854
Transcription machinery [BR:
ming03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
122085854
Chromosome and associated proteins [BR:
ming03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
122085854
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
HHH_7
SPT6_acidic
YqgF
Spt6_S1
HHH_9
Tex_central_region
HTH_44
S1
HHH_3
Tex_N
Motif
Other DBs
NCBI-GeneID:
122085854
NCBI-ProteinID:
XP_042510384
LinkDB
All DBs
Position
8:24440690..24471350
Genome browser
AA seq
1677 aa
AA seq
DB search
MGGRTVVSDDEDDVAEEEEEREVEEVDAEGDAEEADVEERNEDEDEDDDAEEGQDEYEKD
GFIVDDVDEEEEQEEEEEEREDSDKERQKKKKRKKRESEKNYVLDEDDYELLQDNNAPGF
QRLKPGSKKFKRLKKAGRDSEQEERFGFSDEEALDETGRSGRTAEEKLKRSLFGDDEGAP
LEDIAEEEEPPEEEDDDGDMGDEDEMADFIVHEEEEFDENGAPVRRKKPKRKKLRQAPGV
SSAALQEAHDIFGDVEDLLDRRKRSLEKGSRLDEVGEWKEKRLEDEFEPFVLTEKYMTEK
DNQIREIDVPERIQLSEESTGPPPTDGLSIEEASSWIHNQLLTNMVSLPGMKTLTEGSNE
DGLDIIKRIRKEDIVRFLEMLHVQKYDIPFIAMYRKEACPTLLGGPVQDEAEGGEGDNAH
KKPRIKWHKVLWLIKDLDRKWLVLQKRKNALQLYYNKRYEEETRRIYDETRLSLNQQLFE
SITNSLKTAESEREVDDVDSKFNLHFPPGEVGVEEGQFKRPKRKSLYSVCSKAGLWEVAS
KFGYNSEEIGLHMTLEKMRDNIDNDAKDTPEEIASNFTCAMFETPQAVLKGARHMAAVEI
CCEPCVRKHVRNTYMAKAVVSTSPTPAGNAAIDPFHQFAGVKWLHEKPLVKFEDAQWLLI
QKAEEEKLLVVTIKLPAYELNKLVREANDSYLSDGVSKSAQLWNEQRKLILQDALSNFLL
PSMEKEARSLLTARAKNWLLMEYGKNLWNKVSVAPYQRKESDIAADDEAAPRVMACCWGP
GKPSTTFVMLDSSGEVLDVLYTGSLSIKSQNANDQQRKKNGQQRVLKFMTDHQPQVVVLG
AVNLSCTRLKDDIYEIIFKMVEEYPRDVGQEMDNLVVVYADESLPRLYENSRVSSDQLPG
QPGIVKRAAALGRYLQNPLAMVGTLCGPAREILSWKLSPLEHFLTPDEKYMMVEQVMVDA
TNQVGIDINLAVSHEWLFAPLQFVAGLGPRKAASLQRALVRAGAIFSRKELTLNGLKKKV
FINAVGFLRVHRSGLASNSSHIIHLLDDTRIHPESYEIATEMAKEVYKHEVEVDDESNDL
DEDVQEMAIEHVRENPKVLKTLDLEEYATSKELTDKLQTLNDIKMELLHGFQDWRNPYQE
PSQDEEFYIISGETEETLAEGRLVQATVSRVQAQRAFCVLESGLSGMLHREDFSDDPIVN
LTEHLNEGEILTCKIRSIQKHKYQVFLTCKERELRSNSYQSSRSRDPYYREDPSSLQSEQ
EKARKEELAKKHFKPRMIVHPRFQNITADEAMEFLSDKDVGEAIIRPSSRGPSFLTLTLK
IYDGVYAHKDIVEGGKEHKDITSLLRLGKTLKIGHDTFEDLDEVMDRYVDPLVTHLKAML
SYRKFKKGSKAEIDDLLRIEKSEHPMRIVYCFGICHEHPGTFILSYIRSTNPHHEYIGLY
PKGFRFRQKDFEDIDRLVAYFQRHIDDPPPGSTPSIRSVAAMVPMKSPATGGSSGGVSVG
SGWGGSQASNDGGWRGHSYSDRERSSTPGSRTGRNDYRNGGDRHGHPSGVPRPYGGRGRG
RGSYNGRGNDSSNERLDSSYGSSRWGSGSKDGDDGWNNFPGAKVQNSPGREAFPGGWGGG
GGGSAGGDGTVDPGSDVRNSGWGDGPKKSGSAQPAANGWSGSSAGGWTGGGGGGSGW
NT seq
5034 nt
NT seq
+upstream
nt +downstream
nt
atggggggaagaactgtagtctctgacgatgaagatgatgttgcagaggaggaagaagag
agggaagttgaagaagttgatgcagaaggtgatgctgaagaagcagacgttgaggagagg
aacgaagacgaagacgaagatgatgatgcagaagaggggcaggatgaatatgagaaggat
gggtttatcgtagatgatgtggatgaagaggaagaacaggaagaggaagaagaagaaagg
gaagacagtgataaagagaggcaaaagaagaagaagaggaaaaagagagaatcagagaag
aattatgttcttgatgaagatgactatgaattgcttcaggacaacaatgctccgggtttc
cagcgcctgaaacctggtagcaaaaagtttaagcgtttaaaaaaggctggtagagacagt
gaacaggaagagcgatttggattttctgacgaggaagcacttgatgaaactggtcggagt
gggcgaactgcagaggaaaagcttaagcgcagcttatttggggatgatgaaggagcacct
cttgaggatatcgctgaagaggaagaaccaccagaggaagaagatgatgatggggatatg
ggtgatgaggatgaaatggcagattttattgtgcatgaggaagaagaatttgatgaaaat
ggagctcctgtgagacgtaagaagccaaaaagaaagaagctgaggcaggctcctggagtt
tcatcagctgcactgcaggaagctcatgatatatttggtgatgttgaagacctcttggat
cgtcgcaagagaagtcttgagaagggtagtaggcttgatgaagttggtgaatggaaggaa
aaacggttggaggatgaatttgaaccattcgtccttacagagaagtacatgactgagaag
gataatcagataagagaaattgatgtgccagagagaatacagttatctgaggaaagcact
gggccacctccaactgatgggctgagtatagaagaagcgagcagttggatacacaaccag
cttcttaccaatatggtatccttacctgggatgaagacgcttactgaaggaagtaatgag
gatggccttgatataataaaaagaataaggaaggaagacattgtaaggtttttggagatg
ctgcatgtgcagaagtatgatattccttttattgctatgtatcggaaagaggcttgccca
actctgttgggaggaccagtgcaagatgaggcagaaggtggcgagggggataatgcacac
aagaaacctagaataaagtggcacaaggtcttgtggctcatcaaggatttagaccggaaa
tggctagttcttcagaagcggaagaatgctcttcagttgtattataacaagcgctatgaa
gaggagactcgtaggatatatgatgaaacaaggctgtctttgaatcagcagctctttgag
tcaattaccaattctctcaagactgctgaatcagaaagagaggttgatgatgttgactca
aagtttaatctgcatttccctccaggcgaagtgggcgtagaagaaggacaatttaaaagg
ccaaagagaaaatccctatacagtgtatgtagtaaggctggtctttgggaggttgccagc
aagttcggttacaactctgaggagattggattgcatatgactttagaaaaaatgagagac
aacatagacaatgatgcaaaagacactccagaggaaatagcttccaatttcacatgtgca
atgtttgaaactcctcaggctgtgcttaaaggcgccaggcacatggcagcagtggagatc
tgttgtgagccatgtgtccggaaacacgttcgtaatacttatatggcaaaagctgttgtc
tccacaagtcctacacctgcgggtaatgcggctatagatccttttcatcaatttgcagga
gtaaagtggttacacgagaagccactggtgaaatttgaggatgctcagtggcttttaatc
cagaaggctgaagaagaaaaactcctggtggtaactattaagttgccagcatatgagcta
aacaagttagtaagagaggctaatgattcgtatctcagtgatggtgtcagtaaatctgct
caactttggaatgagcagcgcaagttgatcttgcaagatgcgctctccaattttcttctt
ccttccatggagaaggaagctcgttcactgttgactgctagagcaaaaaactggctgctt
atggaatatgggaagaacttgtggaacaaggtctctgttgcaccatatcaacggaaggaa
agtgatattgctgctgatgatgaagctgcaccaagggtcatggcgtgctgttggggtcct
ggtaagccatcaactaccttcgtgatgttggattcatcgggtgaagttctggatgtgtta
tatacggggtctctcagcattaaatctcagaatgctaatgatcagcaacggaagaaaaat
ggccaacaacgtgtcctgaagttcatgaccgaccaccaaccacaagtggtggtcctagga
gctgtgaatttgtcctgcacacggctgaaggatgatatttatgagattatctttaagatg
gtggaggaatatcccagagatgttggtcaagagatggacaatttagttgttgtttatgca
gatgaatctcttcctcgtctttatgaaaactcacgggtttcttcagatcagctacctggt
caaccgggcattgttaaacgtgctgcagctcttgggcgttacctccaaaatcctttggcc
atggttggtactctatgtggaccagcaagggagattttatcgtggaagctcagcccttta
gagcacttcttgactcctgatgagaagtatatgatggttgaacaggtgatggttgatgcc
accaaccaggtaggcattgacatcaatttagcagttagccatgagtggctctttgctcct
ttgcaatttgttgcaggtttaggacctagaaaagcagcttcattgcagagggcattagta
agagctggtgcaattttcagtcgaaaagagttgactcttaatgggcttaaaaagaaggta
ttcatcaatgctgttgggtttttacgtgtgcatcggagtgggcttgcgagtaatagcagc
cacattatacatctgttggatgatacgagaattcatccggagtcgtatgaaattgcaaca
gaaatggcaaaggaggtttataaacatgaggtggaagtagatgatgaatcgaatgattta
gatgaggatgtgcaggaaatggcgattgagcatgtcagagagaacccaaaggtgctgaaa
acccttgatcttgaggaatatgctacatccaaggaattaactgataagctccaaactcta
aatgatataaagatggaactgttgcatgggttccaagactggcgcaatccttaccaagaa
cctagtcaggatgaggaattctatattatttctggtgaaactgaggaaacccttgctgag
ggccgtcttgtgcaggcaacggttagcagggtacaagcacaacgcgcattctgtgtgctt
gaatctggtttgagtgggatgcttcatagggaggacttttcagatgatccaattgttaat
ctaactgagcatctgaatgagggagaaatactaacttgcaagattagaagtattcaaaag
cacaagtaccaggtgtttctgacttgcaaagagagggagttaagaagtaattcatatcaa
agttctcgtagccgtgatccctactaccgggaagacccaagcagtttacagagtgagcag
gagaaagctcgtaaggaggagttagcaaagaagcatttcaagccgagaatgattgttcat
ccccgtttccagaatattactgccgatgaggccatggagttcctttccgacaaggatgtt
ggtgaagctattatccgtcccagttctagagggccatcttttcttactttaacgttgaag
atatatgacggagtttatgctcataaagatatagttgaaggtgggaaagaacacaaggat
atcacaagcttgcttcgtctggggaaaaccttaaaaataggtcatgacacttttgaggat
ttagatgaggttatggatcgttatgttgatccactggtaacacacttgaaggctatgctt
agttaccgcaaattcaagaaggggtcaaaggcagagattgatgacctcttaagaattgag
aaatcagaacatccaatgaggattgtttactgttttggcatttgtcatgagcatcctggt
actttcattttgtcctatatacgaagcacaaatcctcatcacgagtacattgggctgtat
cccaagggattcaggtttcgacaaaaagattttgaggacatagaccgccttgtggcatat
ttccaaagacacattgatgatccccctccgggttcgacgccttcaattcgatcagttgcc
gctatggtaccaatgaagagccctgcaactggaggttcctctggaggggtgtctgtaggc
agtggatgggggggttcgcaagctagcaatgacggtggttggagaggtcattcatattca
gacagagagagatcttccacaccaggttcgagaacaggtagaaatgattacagaaatggt
ggtgatcgacatggacatccaagtggggtgcctaggccctatggcggacgtggacggggc
cgtggctcatacaatggaagaggaaacgacagtagcaatgaaagattagattctagttat
ggttcttccagatggggctcaggttccaaggatggggatgatggctggaacaattttcct
ggtgcgaaagttcaaaattctcccggcagagaagcctttcctgggggttggggtggtggt
ggtggtggtagcgctggtggtgatggtactgtggatcctggatctgatgtcagaaattcg
ggatggggtgatggtcctaagaaaagtggttcagctcaaccggcagcaaatggttggtct
ggaagtagcgctgggggatggactggtggcggtggcggtggcagtggttggtga
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integrated database retrieval system
